Oceanimonas pelagia: PU634_06180
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Entry
PU634_06180 CDS
T09373
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ope
Oceanimonas pelagia
Brite
KEGG Orthology (KO) [BR:
ope00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ope03032
]
PU634_06180 (gyrA)
03400 DNA repair and recombination proteins [BR:
ope03400
]
PU634_06180 (gyrA)
Enzymes [BR:
ope01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PU634_06180 (gyrA)
DNA replication proteins [BR:
ope03032
]
Prokaryotic type
DNA Topoisomerases
PU634_06180 (gyrA)
DNA repair and recombination proteins [BR:
ope03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PU634_06180 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
WMC11954
UniProt:
A0AA50KQP1
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All DBs
Position
1309788..1312400
Genome browser
AA seq
870 aa
AA seq
DB search
MTDLAREIMPINIEEELTRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQDFSMRYTLVDGQGNFGSVDGDSAAAM
RYTEVRMDKIAHELLADLDKETVDWVPNYDGTELIPAVMPTKVPNLLVNGSSGIAVGMAT
NIPPHNLNEVVDGCLALIDDEHISIDQLIELIPGPDFPTGGIINGKSGILDAYRTGRGKI
YVRALAEIETDEKSGRETIIVSELPYQVNKARLIEKIAELVKEKRIEGISALRDESDKDG
MRIVIEVRRGEVGEVILNNLYAQTQMQTVFGINMVALDNNQPRTFNLKEMLECFIQHRRE
VVTRRTVFELRKARDRAHILEGLAIALANIDPVIELIRRSPTPAEAKAGLLAQGWELGNV
ASMLERAGDDAARPEWLEPEYGIRDGQYYLTEQQAQAILELRLHRLTGLEHEKILEEYKA
LLEQIAELLHILNSSARLMEVIREELEALKEQFGDQRRTEITTSSAEINIEDLITQEDVV
VTLSHQGYVKYQPLTDYEAQRRGGRGKSATRMKEEDFVERLLVANTHDTILCFSTAGKVY
WLKVYQLPEASRTARGRPIVNLLPLDEHERITAILPVKEYADDKAVFFATRQGTVKKTEL
TAFSRPLASGIRAINLVEGDELIGVDITDGDNEIMLFSDAGKVVRFHEDQVRAMGRTATG
VRGIRLGDNDSVVSLIVPRGEGAILTATANGYGKRTALEEYPTKSRATLGVVSIKVSDRN
GAVVGAIQVDETNEIMLITNGGTLVRTRVSEVSLISRNTAGVRLIRTGEDEQVVGLQRIE
EPEDDEPIEGEEGLDAGDVSDASAPASDEE
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatttggcccgagaaatcatgccgatcaacattgaggaagagctgacccgctcc
tacctcgattacgccatgagcgtgatcgtggggcgggcccttcccgatgttcgagacggc
ctgaaaccggtgcatcgccgcgtgctgttcgccatgaacgagctcggcaacgactggaac
aaaccctataaaaagtcggcccgtgtggtgggcgatgtaataggtaaatatcacccccac
ggcgacagcgcggtatacgacaccatagtgcgcatggcacaggacttttccatgcgctac
accctggtcgacggccagggcaacttcggctcggtggacggtgactccgccgcggccatg
cgttacaccgaagtgcgcatggacaaaatcgcccacgagctgctggcggacctggacaag
gaaaccgttgactgggtgcccaactacgacggcaccgaactgatcccggcggtgatgccc
accaaggtacccaacctgctggtgaacggctcttccggcatcgccgtgggcatggccacc
aatattccgccccataacctcaacgaggtggtggatggctgcctggcgctgattgatgac
gagcacatcagcatcgaccagctgatcgagctgataccggggccggactttcccaccggc
ggcatcatcaacggcaagtccggcattctcgatgcctaccgtaccggtcgcggcaagatc
tacgtgcgcgccctggcggagattgaaaccgatgagaaaagcggtcgcgagaccattatt
gtctccgagctgccctaccaggtgaacaaggcccggctgatcgaaaagatcgccgagctg
gttaaggaaaaacgcatcgagggcatttccgccctgcgcgacgagtccgacaaggacggc
atgcgcatcgtgatcgaagtgcgccggggcgaggtgggtgaggtgatcctcaacaacctg
tacgcccagacccagatgcagaccgtgttcggcatcaacatggtggcgctggacaacaac
cagccgcgcaccttcaacctgaaggaaatgctggagtgctttattcagcaccgccgcgaa
gtggtgacccgccgcaccgtgtttgaactgcgcaaggcgcgggaccgggcccacatcctg
gaaggcctggcgattgccctggccaacatcgatccggtgattgaactgatccgccgctcg
ccgaccccggcggaagccaaggccggcctgctggcgcagggctgggaactgggcaatgtg
gccagcatgctggagcgtgccggtgatgacgccgcccgtccggaatggctggagcccgag
tacggcattcgtgacggtcagtactacctgaccgagcagcaggcccaggccattctggaa
ctgcgcctgcaccggctgaccggcctcgagcatgagaagatcctggaagaatacaaggca
ttgctggagcagatcgccgagctgctgcacattctcaacagcagtgcccggctgatggaa
gtgatccgcgaagagctggaggcgctgaaagagcagtttggcgaccagcgccgcaccgaa
atcaccacctccagcgccgagatcaacatcgaggatctgatcactcaggaagatgtggtg
gtgaccctgtcgcaccaggggtacgtcaagtaccagccgctcaccgactacgaggctcag
cgccgcggcggccgcggcaagtcggcgactcgcatgaaggaagaagacttcgtcgagcgg
ctgctggtggccaatacccacgacaccattctgtgcttctccaccgctggcaaggtgtac
tggctcaaggtctatcagttgccggaagccagccgcaccgcccgtggccgtcccatcgtc
aacctgttgccgctggacgagcacgagcgcatcactgccattctgccggtgaaggaatac
gccgacgacaaggcggtgttctttgccacccgtcagggcaccgtgaagaaaaccgagctg
accgccttcagccggccgctggcgtcgggcattcgcgccatcaacctggtggagggcgac
gagctgattggggtggacattaccgacggcgacaacgagatcatgctgttctccgatgcc
ggcaaggtggtgcgtttccatgaagatcaggtgcgcgccatgggccggaccgccaccggc
gtgcgcggtattcgtctgggtgacaacgacagcgtggtgtcgctgatcgtgccccgcggc
gagggcgccattctcaccgccaccgccaacggttacggcaagcgcaccgccctggaagag
tacccgaccaagagccgggccactctgggcgtggtgtccatcaaggtgagcgatcgcaac
ggtgccgtggtgggggccattcaggtggacgaaaccaacgagatcatgctgatcaccaat
ggcggtaccctggtgcgtacccgggtgtcggaagtgagcctgatcagccgtaacaccgcc
ggcgtgcgtttgatccgtaccggagaagacgagcaggtggtgggcttgcagcgcattgaa
gaaccggaagacgacgagcccatcgagggcgaggaagggctggatgccggggacgtgagt
gatgcgtctgcaccggccagtgatgaagaataa
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