Oceanimonas pelagia: PU634_06540
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Entry
PU634_06540 CDS
T09373
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ope
Oceanimonas pelagia
Brite
KEGG Orthology (KO) [BR:
ope00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ope03009
]
PU634_06540 (rimO)
Enzymes [BR:
ope01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PU634_06540 (rimO)
Ribosome biogenesis [BR:
ope03009
]
Prokaryotic type
ribosomal protein modification factors
PU634_06540 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Methyltransf_2
DUF5005
Motif
Other DBs
NCBI-ProteinID:
WMC12439
UniProt:
A0AA50KRS6
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Position
complement(1380891..1382204)
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AA seq
437 aa
AA seq
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MSVPRIGFVSLGCPKNLVDSERILTQLRIEGYDVVPSYDDADMVIVNTCGFIDSAVQESL
EAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHRYVPRPEYNP
FVNLVPEQGVKLTPKHYAYLKISEGCNHKCTFCIIPSMRGDLDSRPIGDVLAEAGRLADA
GVKELLVISQDTSAYGVDVKHKTGFASGMPVKTHIQALCEELGKMGVWVRLHYVYPYPHV
DDLIPLMRDGKLLPYLDIPMQHASPRILKLMKRPGAVERTLERIRRWREICPELTIRSTF
IVGFPGETEEDFQMLLDFIEQAELDRVGCFTYSPVEGARANELADPVPEEVKQERYERFM
ALQQQISTRRLAQKVGKTIQVLIDEVDEEGAIGRSSADAPEIDGLVYLNGETGLKPGDMV
TATVTHSDEYDLWAELA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttccccgtatcggctttgtgtctctcggctgcccgaaaaacctggtcgactcc
gagcgtattctgacccaactgcgtatcgaaggttatgatgtggtgccttcctacgatgat
gccgatatggtgatcgtcaatacctgtggttttatcgacagcgccgtacaggaatccctg
gaagccatcggtgaggccctcaacgaaaacggcaaggtcatcgtcaccggctgtctgggt
gccaaggaagatcaaattcgtgaagtgcaccccaaggtgctggaaatcaccggcccccac
tcctacgagcaggtgctggaacacgtgcaccgctatgtgccgcgtccggagtacaacccc
tttgtcaacctggtgcccgagcagggcgtcaagctgacccccaagcactatgcctatctg
aaaatatccgaaggctgcaatcacaaatgcaccttctgcattattccgtccatgcgcggc
gatctggacagccgccctatcggcgacgtgctggccgaggccggccggctggcggatgcc
ggggtcaaggagctgctggtgatctcccaggacacctccgcctacggtgtggatgtgaag
cacaaaaccggctttgccagcggcatgccggtgaagacccacattcaggccctgtgcgaa
gagctgggcaagatgggcgtgtgggtgcgcctgcactatgtctacccctacccccatgtg
gacgacctgattccgctgatgcgcgacggcaagctgctgccctacctggacattccgatg
cagcacgccagcccgcgcattctcaagctgatgaaacgccccggtgcggtggaacgcacc
ctggaacgcattcgccgctggcgcgaaatctgccccgagctcactattcgctccaccttt
atcgtgggcttccccggcgagaccgaggaagactttcagatgctgctcgactttatcgag
caggccgagctggatcgggtgggctgctttacctacagcccggtggaaggcgcccgcgcc
aacgagctggccgatccggtgccggaagaggtcaagcaggaacgctatgagcgctttatg
gcgctgcagcagcaaatctccacccgtcgcctggcgcagaaggtgggcaagaccattcag
gtgctgatcgatgaagtcgacgaagaaggcgccatcggtcgctccagcgccgatgccccg
gagatcgacggcctggtgtacctgaacggagaaaccggtctcaagcccggcgacatggtc
accgccaccgtcacccactccgacgagtatgatctctgggccgaactggcctga
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