Oceanimonas pelagia: PU634_10115
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Entry
PU634_10115 CDS
T09373
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ope
Oceanimonas pelagia
Pathway
ope03030
DNA replication
ope03430
Mismatch repair
ope03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ope00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PU634_10115 (dnaE)
03430 Mismatch repair
PU634_10115 (dnaE)
03440 Homologous recombination
PU634_10115 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ope03032
]
PU634_10115 (dnaE)
03400 DNA repair and recombination proteins [BR:
ope03400
]
PU634_10115 (dnaE)
Enzymes [BR:
ope01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PU634_10115 (dnaE)
DNA replication proteins [BR:
ope03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PU634_10115 (dnaE)
DNA repair and recombination proteins [BR:
ope03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PU634_10115 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
WMC09470
UniProt:
A0AA50KM29
LinkDB
All DBs
Position
complement(2129917..2133390)
Genome browser
AA seq
1157 aa
AA seq
DB search
MTPSFIHLRIHSDFSMVDGLAKIGPINKRVQELGYPALALTDEMNLCGLVRFYGDAHGKG
LKPIVGTDVWVQSEELGEQLFRLTLLAMDNTGYQNITQLISRAYLRGHIQHRPVIDKAWL
AEHGEGLIVLSGGREGDVGVYLLKGNRALAERCLGFYREHFPDRYYLELLRTGRPDEESY
LHMAVALAAAQQLPVVATNEVVFLDKSDFDAHEIRVAIHDGYTLDDKRRPKRYSPEQYLK
SAEEMAELFADIPEALENSVEIAKRCNVTVRLGEYFLPDFPTGDMSIEDYLVKRSQEGLE
ERLEFLFPDPQVRAEKRGEYDERLQVELDVINQMGFPGYFLIVMEFIQWSKDNGIPVGPG
RGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIEHVAEL
YGRDAVSQIITFGTMAAKAVVRDVGRVLGHPYGFVDRISKLIPPDPGMTLAKAFEAEPKL
PELYDQDEEVRALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFSPLYCDAEGRHPVTQF
DKNDVEYAGLVKFDFLGLRTLTIIDWALGMINPRLEKEGKPPVDIAAIPIDDQASFQLLK
RYETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREAV
SYPDEQWQHESLKPILEPTYGIILYQEQVMQIAQVLAGYSLGGADLLRRAMGKKKPEEMA
KQRAGFEAGAVANGIDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHYPAE
FMAAVMTADMDNTDKVVTLVDECQRMGLTIIPPDVNTGRYRFTVNEDGHIVYGIGAIKGV
GEAPIESILEAREQGGPFRDLFDFCNRVDLKKLNKRVMEKLILSGAMDRLGPHRASIMAT
LEEAMKAADQHARAEALGQGDMFGVLVEEDKVEHAFADVPPWPDKIWLDGERDTLGLYLT
GHPINQYARELRHYTSGRLSEVQPGGRDRVSTVAGLVIASRVMTTKRGNRMGILTLDDKS
GRLDVTLFSDALERYESLLEKDKILVISGQVSFDDFSGGLKMSAREVLDISDARERFARG
LALYIDKSRIDQGFFTQLLDILTPVRAGVCPVRVTYNRPGARAELTLGTEWRVTPTDQML
ESLRALLGPDKVELIFD
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgaccccgagctttattcatctgcgcattcactccgacttttccatggtggatggcctg
gccaagatcggccccatcaacaagcgggtgcaggagttgggctacccggcgctggccctg
accgatgagatgaacctgtgtggcctggtgcgtttttacggcgatgcccacggcaagggg
ctcaagcccattgtcggcaccgatgtgtgggtgcaaagcgaggaactgggcgagcagttg
ttccggctgaccctgctggccatggacaacaccggttaccagaacattacccagctgatc
tccagagcctacctgcgtggccatattcagcacaggccggtgatcgacaaggcctggctg
gcggagcacggagaagggctgattgtgctttccggcggccgggaaggggacgtgggggtc
tatctgctcaagggcaaccgggcgctggcagagcggtgcctggggttttaccgtgagcat
tttcccgatcgttattacctcgagctgctgcgtaccggccgccccgacgaagaaagctac
ctgcacatggcggtggcgctggcggcggcacaacagctgccggtggtggccaccaacgag
gtggtatttctggacaagagcgacttcgacgcccacgaaattcgggtggccattcacgac
ggctacaccctggacgacaagcgccggcccaaacgctacagccccgagcagtatctgaaa
agcgccgaggaaatggccgagctgttcgccgacattcccgaggcgctggaaaacagcgtg
gaaatcgccaagcgctgcaatgtgaccgtgcgcctgggtgaatactttctgccggacttt
cccaccggcgacatgagcattgaagactacctggtcaagcgctcgcaagagggcctggaa
gagcggctggagttcctgttccccgacccgcaggtgcgggcggaaaagcgcggcgaatac
gacgagcgcctgcaggtggagctcgacgtgatcaaccagatgggctttcccggctacttc
ctcatcgtgatggaatttattcagtggtccaaggacaacggcattcccgtgggaccgggc
cggggctcgggcgccggctcgctggtggcctatgcgctgaaaatcaccgatctcgatccg
ctggaattcgacctgctgtttgaacgctttctgaacccggagcgggtgtccatgcccgac
ttcgacgtcgacttctgcatggaccggcgcgatgaggtgatcgagcacgtggccgagctg
tacggccgggatgcggtcagccagatcatcactttcggcaccatggcggccaaggcggtg
gtgcgcgacgtgggccgggtgctgggtcacccctatggctttgttgatcgcatctccaag
ctgatcccccccgatcccggcatgaccctggccaaggcctttgaggccgagcccaagctg
cccgagctgtacgatcaggatgaggaagtacgggccctgatcgacatggcccgcaagctg
gaaggggtgacccgcaacgccggcaagcacgccgggggtgtggtcatcgcccccaccaaa
atcaccgacttctcgccactgtactgcgatgctgaaggccgccacccggtcacccagttc
gacaagaacgacgtggaatacgccggcctggtgaagttcgactttcttggcctgcgcacc
ctcaccatcatcgactgggcgctgggcatgatcaaccccaggctggagaaggaaggcaag
cccccggtcgacattgccgccattcccatcgatgaccaggcctcgttccagctgctcaag
cgttatgaaaccacggcggtgttccagctggaatcccggggcatgaaggatctgatcaag
cgcctgcagccggactgttttgaagacatgatcgccctggtggcgctgttccgcccgggg
ccgctgcagtcgggcatggtggacaactttatcgatcgcaagcacggtcgcgaggcggtg
tcctatcccgacgagcagtggcagcacgagtcgctcaagcccattctggaacccacctac
ggcattattctgtatcaggagcaggtgatgcagatagcccaggtgctggccggctattcc
ctcggcggcgccgacctgctgcgccgggccatgggcaagaaaaagcccgaggaaatggcc
aagcagcgcgccggctttgaagcgggcgccgtggccaacggcatcgacggcgaactggcg
atgaagatctttgacctggtggagaaattcgccgggtacggtttcaacaagtcccactcc
gccgcctatgccctggtgtcgtaccagaccctgtggctgaaaacccactatccggcggaa
ttcatggcggcggtgatgaccgccgacatggacaacaccgacaaggtggtgaccctggtg
gacgaatgccagcgcatggggctgaccatcattccccccgacgttaacaccggccgttac
cgcttcaccgtcaacgaagacggtcatatcgtctatggcatcggcgccatcaagggggtg
ggtgaggcgcctatcgaatccatccttgaggctcgcgagcagggcgggccgttccgggat
ctgttcgacttctgcaaccgggtggatctgaaaaagctcaacaagcgggtgatggaaaag
ctgatcctttccggggccatggaccggctgggcccgcaccgggcatccattatggcgacc
ctggaagaagccatgaaggccgccgatcagcacgccagagccgaggcgctgggtcagggc
gacatgttcggcgtgctggtggaagaagacaaggtcgagcacgcctttgccgacgtgcca
ccctggcccgacaagatctggctggacggcgagcgcgacaccctggggctgtatctcacc
ggccaccccatcaaccagtacgcccgagagctgcgtcactacaccagtggccggctgagc
gaggtgcagcccggcggccgcgaccgggtgagcacggtggcggggctggtgatcgcgtcc
cgggtgatgaccaccaagcggggcaaccgcatgggcattcttaccctggacgacaaatcc
ggccggctggacgtgaccctgttctccgatgcgctggaacgctatgagtctttgctggaa
aaagataaaattctggtcatcagcggacaggtcagctttgacgacttctccggtggcctt
aaaatgtcggccagagaagtgcttgacatcagcgatgcccgggagcgctttgcccgcggg
ctcgcactgtacatcgacaaaagccgcatcgatcagggcttttttactcaattgctggac
atactcacgccggtaagggcgggcgtatgtcctgtgcgtgtgacctataaccgacccggc
gcaagagccgagctcactctgggcaccgagtggcgggtaacccccaccgaccagatgctg
gaatcgctcagggccttgctggggccggacaaggtcgaactgatttttgactag
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