KEGG   Oceanimonas pelagia: PU634_10860
Entry
PU634_10860       CDS       T09373                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K19789  DNA repair protein RadD
Organism
ope  Oceanimonas pelagia
Brite
KEGG Orthology (KO) [BR:ope00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ope03400]
    PU634_10860
DNA repair and recombination proteins [BR:ope03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     PU634_10860
SSDB
Motif
Pfam: ResIII Helicase_C DEAD SWI2_SNF2 AAA_22 AAA_16 AAA_30 DZR SLFN-g3_helicase Zn_ribbon_3 Terminase_3 AAA
Other DBs
NCBI-ProteinID: WMC09617
UniProt: A0AA50KMG3
LinkDB
Position
2279117..2280859
AA seq 580 aa
MFTLRPYQQEAVDRTLAYFRRHSEPGVLVLPTGAGKSLVIAELARLARGRVLVLAHVREL
VEQNHAKYQAYGVEADIFSAGLKRRESSRQVVFGSVQSVARNLKAFSGFSLVIIDECHRV
SDDDNSQYAQVINHLRAGNPALKVLGLTATPYRLGLGWIYRTHHHGMVRSRGPRFFEHCL
FELPLRLMIKQGYLCPPELVDAPVVHYDFSRLYEQGLFTEQALERELARQPRVTPHVVEQ
IKDYAEDRQGVMIFAATVRHASEVAGLLPPGHTALVTGDTPGPERDAIIARFKAKELKFL
VNVAVLTTGFDAPHVDLIAILRPTQSVALYQQIIGRGLRLSPGKTDCLVLDYAGNNMDIF
APEVGEPRPNPDTTQVQVPCPACGFANIFWGRTDAEGRVLEHFGRRCQGLFEDEDGGREE
CGYRFRFKSCPQCLAENDIAARQCHDCGEVLVDPDKKLKDALALKDALVLRCAGLTLEAA
NGKYGPALKVTYHDEDGTELHTWYAFDAKGPKGRFYREFVRPHWPAPGTEPDFAGLEQVL
AAAGRFRHPDFVIARAHKRGWQVRETIFDYQGRFRTAHAL
NT seq 1743 nt   +upstreamnt  +downstreamnt
atgtttacgttacgtccctatcagcaggaggcggttgaccgcacccttgcctattttcgc
cgccacagcgagcccggggtgctggtgctgcccaccggcgccggcaagagcctggtgatc
gccgagctggcgcgcctcgcccgcggccgggtgctggtgctggcccacgtgcgcgagctg
gtggagcagaaccacgccaagtatcaggcctacggggtggaagcagatatcttctccgcc
gggctcaagcgccgggaaagcagccgccaggtggtgtttggctcggtgcagtcggtggcc
cgcaacctgaaggccttcagcggcttcagcctggtgatcatcgacgagtgccaccgggtc
tccgacgacgacaacagccagtacgcccaggtcatcaatcatttgcgcgccggcaatccg
gcgctcaaggtgctgggactcaccgccaccccctaccggctggggctgggctggatttac
cgcacccaccaccatggcatggtgcgcagccggggcccgcgcttttttgaacactgcctg
tttgagctgccgctcagactgatgatcaagcagggctacctgtgtccacccgagctggtg
gacgcccccgtggtgcattacgacttttcccggctgtatgagcagggcctgtttaccgag
caggcgctggagcgggagctggcccgccagccccgggtcacgccccatgtggtggagcag
atcaaggactacgccgaagaccgccagggcgtgatgatcttcgccgccaccgtgcgccac
gccagcgaggtggccggcctgctgccccccgggcacaccgccctggtgaccggcgacacg
ccggggccggagcgggacgctatcattgcccgcttcaaggccaaagagctcaagtttctg
gtgaacgtggcggtgcttaccaccggctttgacgctccccatgtggatctgatcgccatt
ttgcggcccacccagtcggtggccctgtaccagcagatcatcggccggggcctgcggctc
agtccgggcaagaccgactgcctggtgctggattacgccggcaacaacatggacatcttc
gccccggaagtgggcgagcccaggcccaaccccgacaccacccaggtgcaggtgccctgc
cccgcctgcggctttgccaatatcttctggggcaggaccgacgccgagggccgggtgctg
gagcactttggccgccgctgccaggggctgtttgaagacgaagacggcgggcgggaagaa
tgtggctaccgctttcgctttaaaagctgcccccagtgcctggcggaaaacgacatcgcc
gcccgccagtgccacgactgcggcgaggtactggtggatccggacaaaaaactgaaggac
gccctggcgctgaaggatgccctggtgctgcgctgcgccggcctcacccttgaggccgcc
aacggcaaatacggcccggcgctgaaggtcacctaccacgacgaggacggcaccgagctg
cacacatggtatgctttcgacgccaagggtcccaagggccgtttttaccgggaatttgtg
cgcccgcactggccggcgccgggcaccgagcccgactttgccgggctggagcaggtgctg
gccgccgccggtcgttttcgccacccggactttgtcatcgcccgggcccacaagcgcggc
tggcaggtccgggaaaccatttttgattatcagggccggtttcgcaccgcccatgccttg
tag

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