Oceanimonas pelagia: PU634_10860
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Entry
PU634_10860 CDS
T09373
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
ope
Oceanimonas pelagia
Brite
KEGG Orthology (KO) [BR:
ope00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ope03400
]
PU634_10860
DNA repair and recombination proteins [BR:
ope03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
PU634_10860
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_22
AAA_16
AAA_30
DZR
SLFN-g3_helicase
Zn_ribbon_3
Terminase_3
AAA
Motif
Other DBs
NCBI-ProteinID:
WMC09617
UniProt:
A0AA50KMG3
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Position
2279117..2280859
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AA seq
580 aa
AA seq
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MFTLRPYQQEAVDRTLAYFRRHSEPGVLVLPTGAGKSLVIAELARLARGRVLVLAHVREL
VEQNHAKYQAYGVEADIFSAGLKRRESSRQVVFGSVQSVARNLKAFSGFSLVIIDECHRV
SDDDNSQYAQVINHLRAGNPALKVLGLTATPYRLGLGWIYRTHHHGMVRSRGPRFFEHCL
FELPLRLMIKQGYLCPPELVDAPVVHYDFSRLYEQGLFTEQALERELARQPRVTPHVVEQ
IKDYAEDRQGVMIFAATVRHASEVAGLLPPGHTALVTGDTPGPERDAIIARFKAKELKFL
VNVAVLTTGFDAPHVDLIAILRPTQSVALYQQIIGRGLRLSPGKTDCLVLDYAGNNMDIF
APEVGEPRPNPDTTQVQVPCPACGFANIFWGRTDAEGRVLEHFGRRCQGLFEDEDGGREE
CGYRFRFKSCPQCLAENDIAARQCHDCGEVLVDPDKKLKDALALKDALVLRCAGLTLEAA
NGKYGPALKVTYHDEDGTELHTWYAFDAKGPKGRFYREFVRPHWPAPGTEPDFAGLEQVL
AAAGRFRHPDFVIARAHKRGWQVRETIFDYQGRFRTAHAL
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgtttacgttacgtccctatcagcaggaggcggttgaccgcacccttgcctattttcgc
cgccacagcgagcccggggtgctggtgctgcccaccggcgccggcaagagcctggtgatc
gccgagctggcgcgcctcgcccgcggccgggtgctggtgctggcccacgtgcgcgagctg
gtggagcagaaccacgccaagtatcaggcctacggggtggaagcagatatcttctccgcc
gggctcaagcgccgggaaagcagccgccaggtggtgtttggctcggtgcagtcggtggcc
cgcaacctgaaggccttcagcggcttcagcctggtgatcatcgacgagtgccaccgggtc
tccgacgacgacaacagccagtacgcccaggtcatcaatcatttgcgcgccggcaatccg
gcgctcaaggtgctgggactcaccgccaccccctaccggctggggctgggctggatttac
cgcacccaccaccatggcatggtgcgcagccggggcccgcgcttttttgaacactgcctg
tttgagctgccgctcagactgatgatcaagcagggctacctgtgtccacccgagctggtg
gacgcccccgtggtgcattacgacttttcccggctgtatgagcagggcctgtttaccgag
caggcgctggagcgggagctggcccgccagccccgggtcacgccccatgtggtggagcag
atcaaggactacgccgaagaccgccagggcgtgatgatcttcgccgccaccgtgcgccac
gccagcgaggtggccggcctgctgccccccgggcacaccgccctggtgaccggcgacacg
ccggggccggagcgggacgctatcattgcccgcttcaaggccaaagagctcaagtttctg
gtgaacgtggcggtgcttaccaccggctttgacgctccccatgtggatctgatcgccatt
ttgcggcccacccagtcggtggccctgtaccagcagatcatcggccggggcctgcggctc
agtccgggcaagaccgactgcctggtgctggattacgccggcaacaacatggacatcttc
gccccggaagtgggcgagcccaggcccaaccccgacaccacccaggtgcaggtgccctgc
cccgcctgcggctttgccaatatcttctggggcaggaccgacgccgagggccgggtgctg
gagcactttggccgccgctgccaggggctgtttgaagacgaagacggcgggcgggaagaa
tgtggctaccgctttcgctttaaaagctgcccccagtgcctggcggaaaacgacatcgcc
gcccgccagtgccacgactgcggcgaggtactggtggatccggacaaaaaactgaaggac
gccctggcgctgaaggatgccctggtgctgcgctgcgccggcctcacccttgaggccgcc
aacggcaaatacggcccggcgctgaaggtcacctaccacgacgaggacggcaccgagctg
cacacatggtatgctttcgacgccaagggtcccaagggccgtttttaccgggaatttgtg
cgcccgcactggccggcgccgggcaccgagcccgactttgccgggctggagcaggtgctg
gccgccgccggtcgttttcgccacccggactttgtcatcgcccgggcccacaagcgcggc
tggcaggtccgggaaaccatttttgattatcagggccggtttcgcaccgcccatgccttg
tag
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