Oceanimonas pelagia: PU634_12375
Help
Entry
PU634_12375 CDS
T09373
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
ope
Oceanimonas pelagia
Brite
KEGG Orthology (KO) [BR:
ope00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ope03021
]
PU634_12375 (rapA)
Transcription machinery [BR:
ope03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
PU634_12375 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
Motif
Other DBs
NCBI-ProteinID:
WMC09894
UniProt:
A0AA50QB84
LinkDB
All DBs
Position
2594106..2596979
Genome browser
AA seq
957 aa
AA seq
DB search
MPFSLGQRWISDTETDLGLGTVVAIDVRMVTMLFPACGENRMYAINDAPVTRVMFNPGDV
ISSHEDWELEVESVSEQDGLLVYHGKRLDTEEETSLKETFLNHFIKLNKPQERLFAGQID
KIGRFNLRYQALMHQFSQRRSPLRGLGSGRIGLIPHQLHIAHEVGNRHAPRVLLADEVGL
GKTIEAGMIIQQQWLSGRAARILILVPDALIHQWLVEMLRRFNLHFALFDEERCVEAFAD
SANPFDTEQLVLCSLDFITKKRKRFEQLADSDWDLLVVDEAHHLVWDAERPSRAYEVVEA
LAENIPGVLLLTATPDQQGHESHFARLRLLDPERFYDYDAFLAEEEEYRPLAEAAEALLS
DAPLDDAARARLAPFMDGEEHASLETSEQRRALLARLLDHHGTGRLLFRNTRQAIKGFPS
RRLHTHPLPLPAQYQTAIRVAGLMGSHQDTAARALQALYPEEIYRQFEGGDSSWTQFDSR
VEWLLDYLKENRNNKVLIITAKAGVALALEEVLRTREGIRGTVFHEGMSLLERDKAAAYF
AQQEGGAQVMICSEIGSEGRNFQFAHQLVLFDLPLNPDLLEQRIGRLDRIGQQHDIDIHV
PYLEGTAQQALTLWYQQGMDAFSKPNAVGQPVYQQVSERLLELLAGHGQDTEALNQLVAD
TQAITQSLISQMELGRDRLLELNSSGALQQHNLAEQLAATDEDPTLAIFAIKLFDEVGVH
QDDKGENAIVLRPTEQMLVPSFPGLPEDGASITFDRHTALGRDDLQFLSWDHPMIRGGID
LVLGSEIGTTSVAILKNKALPVGTLFVEPIFVAESAHHAQLYRFLPPAPIRLLLDKNGNN
LADKVSFEAFDKQLSPVNRHLGSKLVNASQALIHQQLQAAQPLAEQQMEQLVADARARMH
QAMDQELSRLQQLARVNPNVRQSEIDHVQELKTELDSLLSHTRLKLDAIRFIVVSHQ
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgcctttttccctcggccaacgttggatcagcgataccgaaaccgatctgggactggga
accgtggttgccattgatgtgcgcatggtgaccatgttgtttcccgcctgtggtgagaac
cgcatgtacgccatcaacgatgctccggtgacacgagtcatgttcaaccccggcgatgtc
atcagcagtcacgaagactgggagctggaggtggagtcggtgtccgagcaggacggcctg
ctggtttatcatggcaaacgcctagacaccgaagaagaaaccagcctgaaggaaaccttc
ctcaatcactttatcaagctgaacaagcctcaggagcggctgtttgccgggcaaatcgac
aagattggccgcttcaatctgcgctatcaggcgctgatgcaccagttcagccagcgccgt
tcgcctctgcgcggtctgggaagcggccgcattggcctgatcccccatcagctgcacatt
gcccatgaggtgggtaatcgtcacgccccccgggtgctgctggccgacgaagtgggtctg
ggcaaaaccattgaagcgggcatgatcattcagcagcagtggctctcgggccgggccgcg
cgcattcttatcctggtgcccgatgccctgatccaccagtggctggtggaaatgctgcgc
cggttcaacctgcactttgccctgtttgacgaagagcgctgcgtcgaggcctttgccgac
tcggccaatccctttgataccgagcagctggtgctgtgcagcctcgatttcatcaccaaa
aagcgcaagcgctttgagcagctggccgacagcgactgggatctgctggtggtggacgaa
gctcaccacctggtatgggacgccgagcgccccagccgcgcctatgaggtggtggaagcc
ctggccgaaaacattcccggcgtactgctgctcaccgccaccccggatcagcagggccac
gagagccattttgcccgtctgcgcctgctcgaccccgagcgcttttacgactacgacgcc
tttctggcggaagaggaagaataccgcccgctggccgaggccgccgaggcactgctgagc
gacgcaccgctggacgacgccgcccgtgcacgcctggcgccctttatggacggcgaagaa
catgccagcctggaaacttccgagcaacgccgggcactgctggcccggctgctggatcat
cacggcaccggccgcctgctgttccgcaacacccgtcaggccatcaagggctttccgtcg
cgccggctgcatacccacccgctgcccctgcccgcccagtaccagaccgccattcgcgtg
gccggcctgatgggcagccatcaggacaccgccgcccgggcactgcaggccctgtacccg
gaagagatctaccgccagttcgaaggtggcgacagcagctggacccagttcgacagccgg
gtggaatggctgctggactacctcaaggaaaaccgcaacaacaaggtgctgatcatcacc
gccaaggccggcgtggccctggcactggaagaagtgctgcgcacccgggagggcattcgc
ggcaccgtgtttcacgagggcatgtcgttgctggagcgggacaaggccgccgcttacttt
gcccagcaggaaggcggcgcccaggtgatgatctgctccgagatcggctcggaaggccgc
aacttccagtttgcccaccagctggtgctgtttgacctgccgctgaatccggatctgctg
gagcagcgcatcggccgcctggaccgcattggccagcagcacgacatcgacattcacgtg
ccctatctggaaggcaccgcccagcaggcgctgaccctgtggtatcagcagggtatggat
gccttcagcaagcccaatgcggtggggcagccggtgtatcagcaggtatcggaacgactg
ctggaactgctggccggccacggtcaggatactgaagccctgaaccagctggttgccgac
acccaggccatcacccaatccctgatcagccagatggagctggggcgggatcggctgctg
gagctcaactccagcggcgccctgcagcaacacaatctggcggagcagctggcggcaacc
gacgaagatccgaccctggccatttttgccatcaagctgtttgacgaagtgggcgtgcat
caggacgacaagggcgaaaacgccatcgtgctgcgccccaccgagcaaatgctggtaccc
agttttcccggcctgcccgaagacggtgccagcatcacctttgaccggcataccgccctg
gggcgggacgatctgcagtttttgagctgggatcatccgatgatccgcggcggcatcgat
ctggtgctgggctcggaaatcggtaccacctcggtggccattctcaagaacaaggcgctg
ccggtgggcaccctgtttgttgaacccatctttgtggccgagtccgcccatcacgcccag
ctgtatcgttttctgccgccggcgcccattcgcctgctgctcgacaagaacggcaacaac
ctggccgacaaggtcagctttgaagcctttgacaagcagctcagtccggtcaaccgtcac
ctgggcagcaagctggtcaatgcctcccaggccctgatccaccagcagctgcaggcagcc
cagccactggccgagcaacagatggagcaactggtcgccgacgcccgtgcacgcatgcac
caggccatggatcaggagctgagccggctgcagcaactggccagggtcaaccccaacgtg
cgccagagcgagatcgatcatgtgcaggagctgaaaaccgagctcgacagcctgctcagt
catacccgcttaaaactggatgcaatccggtttattgtggtcagccatcagtaa
DBGET
integrated database retrieval system
