Oceanimonas pelagia: PU634_12535
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Entry
PU634_12535 CDS
T09373
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ope
Oceanimonas pelagia
Pathway
ope03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ope00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PU634_12535 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ope03019
]
PU634_12535 (orn)
03009 Ribosome biogenesis [BR:
ope03009
]
PU634_12535 (orn)
Messenger RNA biogenesis [BR:
ope03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PU634_12535 (orn)
Ribosome biogenesis [BR:
ope03009
]
Eukaryotic type
Pre-60S particles
RNases
PU634_12535 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
WMC09919
UniProt:
A0AA50KM08
LinkDB
All DBs
Position
complement(2624942..2625487)
Genome browser
AA seq
181 aa
AA seq
DB search
MSQSAENLVWIDLEMTGLEPDEHRIIEIASIVTDKELNILAEGPVLAIHQSEAELGKMDD
WNVRTHTGSGLVARVKASTITEADAVAQTLAFLRQWVPQGSSPLCGNSIGQDRRFLARHM
PELEAFFHYRNVDVSTIKELVRRWQPALLEQFTKKGSHQALDDIRESIAELQFYRQHVFT
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaagtgccgaaaacctggtatggatcgatctggaaatgaccggtctggagccc
gacgaacaccgcattattgaaattgccagcattgttaccgacaaggagctgaacattctg
gcggaagggccggtgctggccattcaccagagcgaggcggagctgggtaaaatggacgac
tggaatgtgcgcactcacaccggctccggtctggtggcacgggttaaagccagcaccatt
accgaagccgatgcggtggcgcagaccctggcctttttgcgccagtgggtgccgcagggc
agctcgcccctgtgcggcaactccattggccaggaccggcgctttctggcccggcacatg
ccggagctggaagccttctttcactaccgcaatgtggatgtgagcaccatcaaggagctg
gtgcgccgctggcagccggcgttattggaacagttcaccaaaaagggcagtcaccaggcg
ctggacgacattcgcgagtccattgccgagctgcagttctatcgccagcatgtgttcacc
atttaa
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