Oceanimonas pelagia: PU634_12755
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Entry
PU634_12755 CDS
T09373
Name
(GenBank) type III PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ope
Oceanimonas pelagia
Pathway
ope00300
Lysine biosynthesis
ope00470
D-Amino acid metabolism
ope01100
Metabolic pathways
ope01110
Biosynthesis of secondary metabolites
ope01120
Microbial metabolism in diverse environments
ope01230
Biosynthesis of amino acids
Module
ope_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ope00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PU634_12755
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PU634_12755
Enzymes [BR:
ope01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PU634_12755
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WMC09960
UniProt:
A0AA50KLD3
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All DBs
Position
2668646..2669863
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AA seq
405 aa
AA seq
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MTPSITQYLSQRRQQPNGEPLCAYLYDLDALAAHARQLREALPANCELFYAAKANPMAPI
LETLAPVVDGFEAASGGELAWLAERHPEQRLLFGGPGKLESELEQALTLGVECIHVESLT
ELQRLAALGARLGRRVPLMLRMNIPLDGMPSTRLAMAGKPTPFGLDPEDLPEALALIAEQ
DRLDLQGFHFHLMSHQLDPRVQLALIQHCLRTVGDWQARFGLDLSVINLGGGIGVDYRQP
NRRFDWPGFCQALRQLIDEEPMGKLRLRFECGRFISAYCGYYVMEVLDIKRNHGEWFAIG
RGGTHHFRTPAAQDHDHPFHLVRSERPPRLRNENVTLVGQLCTPKDVLARRQPIAELAIG
DWLVFRHAGAYAWNISHQRFLMHPAPEQIFLRGGTAFSSPVDEAQ
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgacccccagcattactcaatacctgtcccagcgccggcaacagcccaacggcgagccc
ctgtgcgcctacctgtacgatctggacgccctcgccgcccacgcccgccagctgcgcgag
gcgctgcccgccaactgcgagctgttctacgccgccaaggccaaccccatggcgccgatc
ctcgagaccctggcgcccgtcgtcgatggctttgaagcggcctccggcggcgaactggcc
tggctggccgagcgccaccccgagcaacgactgctgttcggcggccccggcaagctggag
tccgagctggagcaggcgctgaccctgggcgtggagtgcattcatgtggaaagcctgacc
gagctgcagcgcctcgccgccctcggcgcccggctcggccggcgggtgccgctgatgctg
cgcatgaacattcccctcgacggcatgcccagcacgcgcctggccatggctggcaaaccc
accccctttggcctggatccggaggatctgcccgaggcgctggcgctgatcgccgagcag
gaccggctggatctgcagggctttcattttcatctcatgtcccaccagctggatcctcga
gtgcaactggccctgatccagcactgcctgcgcaccgtcggcgactggcaggcgcgcttc
ggcctggatctgtcggtgattaacctgggtggcggcatcggcgtcgactacaggcagccg
aaccggcgctttgactggccgggcttttgccaagcgctgcggcagctgatcgacgaggag
cccatgggcaaactgcggctgcgctttgaatgcggccgtttcatcagcgcctactgcggc
tattacgtgatggaggtgctcgacatcaagcgcaaccacggcgaatggttcgccatcggt
cgcggcggtacccatcactttcgcaccccggccgcccaggatcacgaccacccgtttcac
ctggtgcggagtgaacggccgccacggctgcgcaacgaaaacgtcaccctggtgggccag
ctgtgcacccccaaggacgtgctggcccgccgccagcccatcgctgagctggccatcggc
gactggctggtgttccgccatgccggtgcctacgcctggaacatttcccaccagcgcttt
ctgatgcacccggcgccggagcagatatttctgcgcggcggcaccgccttcagctcgccc
gtcgacgaggcacaataa
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