KEGG   Oceanimonas pelagia: PU634_15055
Entry
PU634_15055       CDS       T09373                                 
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
  KO
K03089  RNA polymerase sigma-32 factor
Organism
ope  Oceanimonas pelagia
Brite
KEGG Orthology (KO) [BR:ope00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ope03021]
    PU634_15055 (rpoH)
Transcription machinery [BR:ope03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PU634_15055 (rpoH)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r1_2 2Fe-2S_thioredx SWC7 Fe_dep_repress GntR
Other DBs
NCBI-ProteinID: WMC12475
UniProt: A0AA50Q8W5
LinkDB
Position
complement(3140299..3141156)
AA seq 285 aa
MTTDFQRHFALVPQGSLEAYIQAVNTIPVLSAEEEKSLAERLQNEGDLAAARQLVMSHLR
FVVHIAKSYAGYGLPQADLIQEGNIGLMKAVKRFDPGVGVRLVSFAVHWIKAEIHEYVLR
NWRVVKVATTKAQRKLFFNLRKSKKRLGWFNQQEVNRVAEDLGVSPSEVLEMESRMSAQD
QAFDLASDDDEREGSFAPVHYLEDKSSDVATQVEEANWEQTANRRLRAALNALDERSQRI
IQARWLEEDDKTTLQSLADEYGVSAERIRQLEKTALKKLKAAMEA
NT seq 858 nt   +upstreamnt  +downstreamnt
atgacgacagattttcagcgccattttgccctggtgcctcagggcagcctggaggcctat
atccaggcggtgaacaccattcccgtgctcagtgcggaggaagaaaagtccctggccgaa
cgcctgcagaatgagggcgatctggccgcggcgcgtcagctggtgatgtcgcacctgcgt
tttgtggtgcacattgccaagagttatgccggctacggcctgccccaggcggatctgatc
caggaaggcaacatcggcctgatgaaggcggtcaagcgtttcgacccgggcgtgggtgtg
cggctggtgtcttttgcggtgcactggatcaaggccgaaattcacgaatacgtgctgcgc
aactggcgcgtggtcaaggtggccaccaccaaggcccagcgcaagctgttcttcaacctg
cgcaagtccaagaaacgcctgggctggtttaaccagcaggaagtgaaccgggtggccgag
gatctgggcgtgtcgccctcggaagtgctggagatggaatcgcgcatgagtgcccaggat
caggcctttgacctggcctccgacgacgacgagcgcgaaggcagctttgccccggtgcac
tacctggaagacaaaagctccgacgtggccacccaggtggaagaagccaactgggagcaa
accgccaaccgtcgcctgcgcgccgccctgaacgccctcgatgagcgcagccagcgcatt
attcaggcgcgctggctggaggaagacgacaagaccacgctgcagagcctggccgacgaa
tacggcgtgtccgccgagcgtattcgccagctggagaaaaccgcactgaaaaagctcaag
gccgccatggaggcataa

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