Oceanimonas pelagia: PU634_16085
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Entry
PU634_16085 CDS
T09373
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ope
Oceanimonas pelagia
Pathway
ope00300
Lysine biosynthesis
ope00470
D-Amino acid metabolism
ope01100
Metabolic pathways
ope01110
Biosynthesis of secondary metabolites
ope01120
Microbial metabolism in diverse environments
ope01230
Biosynthesis of amino acids
Module
ope_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ope00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PU634_16085 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PU634_16085 (dapF)
Enzymes [BR:
ope01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PU634_16085 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
WMC10571
UniProt:
A0AA50QBY2
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All DBs
Position
3358090..3358923
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AA seq
277 aa
AA seq
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MSTLHFSKMQGLGNDFMVVDGVTQKVFFNPEVIRQLADRHFGVGFDQLLLVEPPYDPELD
FHYRIFNADGSEVEQCGNGARCFARFVRLKGLTNKDRIAVSTQKGNIVLQLEKDDQVTVN
MGVPEFEPAQIPFKAQKAEKTYLVRAQDQTVLCGAVSMGNPHCVVEVDDINTPLVGTLGP
ELETHERFPARVNVGFMQIVNAREVKLRVHERGAGETLACGTGACAAAVMGMSWGKLADR
VKVALPGGTLTIAWQGPGKPVFMTGPAKHVFDGQISL
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgcttcatttctccaagatgcaggggctgggcaacgacttcatggtggtggac
ggcgtcacccagaaggtgtttttcaaccccgaggtgatccgccagctggcggatcgtcac
ttcggcgtgggttttgatcagctgctgctggtggagccgccctacgatcccgagctcgac
tttcactaccgcatcttcaatgccgacggctccgaggtggagcagtgcggcaacggtgcc
cgctgttttgcccgttttgtacggctcaagggcctgaccaacaaggatcgcatcgccgtc
agcactcaaaaagggaatattgtgctgcagctggaaaaggacgatcaggtcaccgtcaac
atgggggtgcccgagttcgagccggcgcagattccgttcaaggcccagaaggcggaaaaa
acctatctggtgcgtgcccaggatcaaaccgtgctgtgtggtgccgtgtccatgggtaac
ccgcactgcgtggtggaggtggacgacatcaatacgccactggtgggcacgcttggaccc
gagctggaaacccacgagcgttttccggcccgggtgaatgtgggctttatgcagattgtg
aacgcccgggaagtgaagctcagggtgcacgagcgcggcgccggcgaaaccctggcctgc
ggcaccggtgcctgtgcggcggcggtgatgggcatgagctggggcaagctggcggacaga
gtaaaggttgcactgcccggcggtaccctcaccattgcctggcagggaccgggcaagccg
gtgttcatgaccgggccggccaagcatgtgtttgacggacagatcagtctatga
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