Oceanimonas pelagia: PU634_16105
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Entry
PU634_16105 CDS
T09373
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ope
Oceanimonas pelagia
Pathway
ope03420
Nucleotide excision repair
ope03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ope00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PU634_16105 (uvrD)
03430 Mismatch repair
PU634_16105 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ope03400
]
PU634_16105 (uvrD)
Enzymes [BR:
ope01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PU634_16105 (uvrD)
DNA repair and recombination proteins [BR:
ope03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PU634_16105 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
PU634_16105 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WMC10575
UniProt:
A0AA50KMK4
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All DBs
Position
3361329..3363497
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AA seq
722 aa
AA seq
DB search
MDVSSLLDGMNDKQREAVAAPSQNMLVLAGAGSGKTRVLVHRIAWLMQVEQVPASAILAV
TFTNKAAAEMRSRVEQLLGGRLFGLWLGTFHGLAHRLLRAHHLDANLPQDFQILDSDDQL
RLLRRILKSMNLDEKQWPPRQVAGYINGRKDEGLRPGDIQVLNDPLQKTWRQIYQVYQDT
CDRAGLVDFAELLLRAHELWLYKPHILQHYQQRFQHILVDEFQDTNSIQYAWLRLLAGDS
ARVMIVGDDDQSIYGWRGARVENISRFLQDFPGAETVRLEQNYRSTGTILKAANRLIANN
AERMGKELWTEGTEGEPIAVYSAFNEVDEARFVVERIKQWRNQDGALSDSAILYRNNAQS
RVLEEALIQERIPYRIYGGLRFFERQEIKDALGYLRLINNRGDEASFERIVNTPTRGIGE
RTLGLIREAARDRQLTLWRAAWVLVEEKVLTGRAAAAVSRFINLINQLEDDTRELPLHVQ
TDRVIELSGLKAMYQAEKGEKAQSRVENLEELVTATRQFTPSEEEDMSPLSAFLSHAALE
AGEGQADQFDDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQLSAEESRRLEEERRLAYV
GMTRAMQKLYITHAESRRLYGREMFHRPSRFIKELPAECLEEIRLKAKVTRAIPNGRFSQ
DRVQDTFNQTGFRLGQRVLHPKFGEGVVLNYEGAGAQSRVQVNFDDGGAKWLVTAYARLE
AI
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggatgtatccagcctgcttgacggcatgaacgacaagcaaagagaggcggtggccgcc
ccttcccagaacatgctggtgctggccggtgccggcagtggcaagacccgggtgctggtg
catcgcattgcctggctgatgcaggtggagcaggtgccggcctcggccatactggcggtg
acctttaccaacaaggccgctgccgaaatgcgcagccgggtggagcaactgctcggtggc
cgcctgtttggcctctggctgggcacttttcacggtctggcgcaccggctgctgcgggcc
caccatctcgacgccaacctgccccaggactttcagatcctcgactccgacgatcagctg
cgtctgctcaggcgtattctcaagagcatgaacctggatgaaaagcagtggccgccccgt
caggtggccggctacatcaacggtcgcaaggacgagggcctgcgccccggcgacattcag
gtgctcaacgatccgctgcaaaagacctggcgtcagatctatcaggtctatcaggatacc
tgcgaccgtgccgggctggtggactttgccgagctgctgctgcgggcccacgagctgtgg
ctgtacaagccgcacattctgcagcactaccagcagcgctttcagcacattctggtggac
gagtttcaggacaccaacagcattcagtacgcctggctgcgcctgctcgccggcgacagc
gcccgggtgatgatagtgggtgacgacgatcagtccatttacggctggcgcggcgcccgg
gtggaaaacatctcccgttttctgcaggactttcccggcgccgagacggtgcggctggag
cagaactaccgctccaccggcaccattctcaaggctgccaaccggctgattgccaacaac
gccgagcgcatgggcaaggagttgtggaccgaaggcaccgaaggcgagcccatcgccgta
tacagcgcctttaacgaagtggacgaggcccgctttgtggtggagcgcatcaagcaatgg
cgcaatcaggacggggccttgagcgacagcgccattctctaccgcaacaacgcccagtcc
cgggtactggaagaagcactgatccaggagcgcattccctaccgcatctacggcggcctg
cgcttctttgaacgccaggagatcaaggatgccctcggttacctgcggctcatcaataac
cggggcgatgaggcttcgtttgagcgcatcgtcaacacccccacccggggcattggcgaa
cgcacgcttgggttaatccgtgaggcggcccgggatcgccagctcaccctgtggcgggcg
gcctgggtgctggtggaagaaaaggtgctgaccggccgggccgccgccgcggtgagccgc
tttatcaacctgattaaccagctggaagacgacacccgcgagctgccgctgcatgtgcag
actgaccgcgtgatcgagctgtcgggcctcaaggccatgtatcaggcggaaaagggcgaa
aaggcccagtcccgggtggaaaacctggaagaactggtcaccgccacccggcagttcact
ccgtcggaagaagaggacatgtcgccgctgtcggcatttttgtcccatgctgcgctggag
gcgggcgagggtcaggcggatcagtttgacgatgccgtgcagctgatgaccctgcactcc
gccaagggcctggaattcccgctggtgtttatggtgggggtggaagagggcatgtttccc
agccagttgtcggcggaggaaagccggcggctggaggaagagcgccggctggcctatgtg
ggcatgacccgggccatgcagaagctctacattacccatgccgagagccgccgcctctac
ggccgggaaatgtttcaccgccccagccgctttatcaaggagctgcccgccgagtgcctc
gaggaaatcaggctcaaggccaaggtgacccgggccatacccaacggtcgcttcagccag
gaccgggtgcaggacacctttaaccagaccgggtttcgcctgggccagcgggtgctgcat
cccaagtttggcgaaggcgtggtgctcaactacgagggcgccggtgcccagagccgggtg
caggtcaactttgacgacggcggcgccaaatggctggtgaccgcctacgcccggctggaa
gcgatttaa
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