KEGG   Oceanisphaera profunda: CBP31_01640
Entry
CBP31_01640       CDS       T04856                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
opf  Oceanisphaera profunda
Pathway
opf03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:opf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CBP31_01640
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:opf03400]
    CBP31_01640
DNA repair and recombination proteins [BR:opf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CBP31_01640
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CBP31_01640
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd Helicase_C UvrB ResIII DEAD UVR UB2H AAA_30 AAA_22
Other DBs
NCBI-ProteinID: ART81494
UniProt: A0A1Y0D2E6
LinkDB
Position
complement(377195..379195)
AA seq 666 aa
MSKDFQLVSPYQPAGDQPTAIAQLLDGIEAGLAHQTLLGVTGSGKTFTIANVIATLNRPT
MILAPNKTLAAQLYGEMKEFFPHNSVEYFVSYYDYYQPEAYVPTTDTFIEKDASINDHIE
QMRLSATKALMERRDVIIVASVSAIYGLGDPQSYLSMMLHLRVGDVLNQRDMLRRLAELQ
YKRNDAGFQRGTFRVRGEVIDIFPAESDNQAVRVELFDDEIERLSLFDPLTGGVSQTLAR
FTIYPKTHYVTPREKLMGAIEHIKVELQERKTQLLSSNKLVEEQRISQRTQFDIEMIQEL
GYCSGIENYSRYLSGRGEGEAPPTLFDYLPGDGLLIIDESHVTVPQIGGMYKGDRSRKET
LVEYGFRLPSALDNRPMRFDEFEALMPQTVFVSATPSAYELDKSGDDVAQQVVRPTGLLD
PVIEVRPVATQVDDVLSEARLRIAVNERVLVTTLTKRMAEDLSEYLSDHGLKVRYLHSDI
DTVERMEIIRDLRLGVFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNLNGKAILYGDRITRSMGAAISETERRRELQQAFNLEHGITPRGLTKAVTDVLDLD
GTKRIGSKRAKDQSLMPEHLPTAKELDKQITELEKVMVTHAQNLEFEQAAATRDRIHALR
DQLIRS
NT seq 2001 nt   +upstreamnt  +downstreamnt
atgagcaaagactttcaactggtcagcccctatcagcctgctggcgatcagccaacggcc
attgcccagttgctggatgggattgaagctgggcttgcccatcaaactttgctcggcgtt
accggctcaggcaaaacctttaccatcgccaatgtgattgccacccttaatagacccacc
atgatcttggcgcctaacaaaactctagcggcgcagctatacggggaaatgaaagagttc
ttccctcataactcggtggagtattttgtttcttactacgactactatcagccagaagcc
tatgtgcccactaccgatacctttatcgaaaaagacgcctctattaacgatcatatagag
caaatgcgtttgtccgccaccaaggcgctcatggagcggcgtgatgtaattatcgtggcc
tcggtgtcggccatttatggtttgggcgatccgcagtcgtatttaagtatgatgttgcat
ctgcgggtgggagatgtgctcaatcagcgcgatatgttgcgccgcttagctgagttgcaa
tataagcgcaacgacgcgggctttcagcgcggtacttttagggtgcgcggtgaagtgatt
gatattttccctgctgagtctgataaccaagcggtacgggtcgagttattcgatgatgag
atagagcgtttaagcttatttgaccccttaaccggcggcgtttcgcaaacgctagcacgc
tttactatttatccgaaaactcactatgtgacgccgcgggaaaagctaatgggtgccatc
gaacacatcaaggtcgagctgcaagagcgcaagacgcaattgctgtcgtccaacaagctg
gtagaagagcagcgcatcagccagcgcactcaatttgatatcgaaatgatccaagagctg
ggttattgctcgggcattgaaaactactcgcgctatctatctgggcgcggcgagggtgag
gcaccgcctaccttatttgattacttgcctggcgatggtctattgatcatcgatgaatcc
cacgtaacggtgccgcaaattggcggcatgtataaaggtgaccggtctcgtaaagaaacc
ttagtggaatacggctttcgtctgccctcggcgctggacaaccggccgatgcgctttgat
gaatttgaagcactgatgccacaaaccgtgtttgtctcagccacacccagcgcctatgag
ttggataaatccggtgatgacgtggcccagcaggtggtgcgccccaccggtttgttagat
cctgtaatagaagtacgcccagtggccactcaggtggacgacgtattgtcggaagctcgc
ttgcgcattgccgtgaacgagcgggtactggtgaccaccttaaccaagcgcatggccgaa
gatttatcggaatatttatcagatcacggtttaaaagtgcgctatttgcactcagatatc
gacaccgtagaacggatggagattattcgcgacttgcgcttaggcgtgtttgacgtatta
gtgggcatcaacttattgcgcgaagggctagatatgccagaagtgtccttggtggcgatt
ttggatgcggataaagaaggtttcttacgctcggagcgctccttgattcagaccataggc
cgagcggcccgtaacctaaacggtaaggctattctatatggcgatagaattactcgctct
atgggggcggccatcagtgaaaccgagcgccgccgcgagctacagcaagcctttaactta
gagcacggcattactccgcgaggtttaaccaaagcggtaaccgacgtgctggatttagac
ggcaccaagcgtattggctctaagcgcgctaaagaccagagtcttatgcccgaacatttg
cctaccgccaaagagctggataaacagatcaccgagctggaaaaagtcatggtcactcac
gcgcaaaacctggagtttgaacaagccgccgccactcgcgaccgcattcacgccctgcgc
gatcagttgatccgcagctaa

DBGET integrated database retrieval system