Oceanisphaera profunda: CBP31_01705
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Entry
CBP31_01705 CDS
T04856
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
opf
Oceanisphaera profunda
Brite
KEGG Orthology (KO) [BR:
opf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
opf03032
]
CBP31_01705
03400 DNA repair and recombination proteins [BR:
opf03400
]
CBP31_01705
Enzymes [BR:
opf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CBP31_01705
DNA replication proteins [BR:
opf03032
]
Prokaryotic type
DNA Topoisomerases
CBP31_01705
DNA repair and recombination proteins [BR:
opf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CBP31_01705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ART81506
UniProt:
A0A1Y0D2R8
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All DBs
Position
complement(394108..396738)
Genome browser
AA seq
876 aa
AA seq
DB search
MSKSLVIVESPAKAKTINKYLGKDFIVKSSVGHVRDLPTSGSALAKKAPAKKVDTKSLSP
EQKAKLKAQKDQKALIARMGIDPNNGWQANYQILPGKEKVVTELQALAEKADTIYLATDL
DREGEAIAWHLKELIGGDDSRFKRVVFNEITKSAIQEAFSQPSELNQFRVDAQQARRFLD
RVVGYMVSPLLWKKVARGLSAGRVQSVAVRLLVEKEREIKAFVPEEYWDIQAQLSNTEQL
ALSMAVAKFKGKEFKPDNETDAMAAVAALKASSFEVVSRDDKPTQSKPSAPFITSTLQQA
ASTRLSFGVKRTMMLAQRLYEAGYITYMRTDSTNLSQEAVASAREFIEQQYGTDYLPENP
VVYSAKANAQEAHEAIRPSDVTISAEELNGMEADAKRLYDLILRQFLACQMTPALYDSTT
ITVRAGDYDLKARGRILRFAGWTKVQEAAKGRKGEDTVLPAVQAGETLKLEQLDPKQHFT
KPPARFSEAALVRELEKRGIGRPSTYAAIISTIQDRGYVKVESRRFYAEKMGEIVADRLQ
ESFAELMNYDFTAQMESKLDEIAHGELNWTTVLDAFYAEFTEELANAERPAEEGGMRANE
MVITDIKCPTCDRDMGIRTASTGVFLGCSGYALPPKERCKQTINLVPGDEFVLANDEEAE
TDALRAKHRCEKCGTAMDAYFIDDKRKLHVCGQNPDCDGYELEEGQFKLKGYDGPVIECD
RCEAEMQLKNGRFGKYMACTNEECKNTRKILKNGDVAPPKEDPVHLPELPCTQSDAYFVL
RDGAAGIFMAASNFPKSRETRAPLVEELVQFKDRLSPKFTYLTEAPVKDPEGNKAVVRYS
RKNKEQYVMTEIEKKATGWTAHYIDGKWVQAQKGKK
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatcgctggtaatagtggaatcgcctgctaaggcaaaaaccatcaacaaatat
ctgggcaaagactttatcgttaagtccagtgtcggccacgtgcgtgacttgccaacctct
ggctcggcgctagcaaaaaaagcgccggctaaaaaagttgatactaaatccttgagcccc
gagcagaaagccaagttgaaagcgcaaaaagaccaaaaggccttgattgcgcgcatgggc
atagacccgaacaacggctggcaggcaaattatcaaatattgccgggtaaagagaaggtg
gtcaccgagttacaagcattggcggaaaaagccgacaccatctatctcgcaacggatttg
gaccgcgaaggggaagccattgcttggcacctgaaagagctgatcggcggtgacgattcg
cgctttaagcgggtagtatttaacgagatcactaagtctgcgattcaagaagcctttagc
cagccctctgagctcaatcagtttcgtgtggacgcccagcaagcccgccgctttttagac
cgcgtggttggctacatggtatcgccactgttgtggaagaaagtggcccgtggcttatcc
gcaggccgcgtacaatcggtagcggtgcgcttactggtggaaaaagagcgtgaaattaaa
gccttcgtccccgaagaatattgggatattcaagcccagctcagcaacaccgaacaacta
gcgctgtcgatggcggtggcgaaatttaaaggtaaagaatttaagcccgataatgaaacc
gacgccatggcggcggtggctgcactcaaggccagtagctttgaagtggtatcgcgtgat
gataagcccacccaaagcaaaccgtcggcgccctttattacctcgaccttgcaacaggct
gccagcacccgcttaagctttggtgtaaaacgtaccatgatgttggcccaacgcttgtat
gaagccggctacatcacctatatgcgtaccgactccaccaacttaagccaagaggcggtg
gccagcgcccgggaatttatcgagcagcaatacggcaccgattacctgccagaaaatccg
gttgtttacagtgccaaggccaatgctcaagaagcccacgaagcgatccgcccgtccgat
gtgaccatcagtgccgaagagctcaatggcatggaagcggacgccaagcgcttatacgat
ttaattttgcgccaattcttggcctgccagatgacgccggctttgtatgacagcactacc
attaccgtgcgcgccggtgattacgacttaaaagcccgtgggcgcatcttacgctttgcc
ggttggaccaaggttcaagaagccgctaaaggccgcaaaggtgaagatacggtgctgcca
gcggtgcaagcaggcgagacccttaagcttgagcagctggatcctaagcagcactttacc
aagccacccgcacgctttagtgaggcggcactggtgcgcgagctggagaagcgcggcatc
ggtcgaccttcgacttacgcggctattatttccaccattcaagaccgtggttatgtgaaa
gtagaaagccgccgtttctatgcggaaaaaatgggtgagatagtcgccgatcgtctgcaa
gaaagttttgccgagctgatgaactatgatttcacggcgcaaatggaaagtaagctcgat
gaaatcgctcacggcgagctgaactggaccacagtgctggacgccttttacgcagaattt
accgaagagttagccaacgctgagcgcccagcagaagagggcggcatgcgtgccaatgaa
atggtgatcaccgatatcaagtgccccacttgtgaccgagacatgggcattcgtaccgcc
agcaccggcgtgtttttaggttgctcaggctatgccttaccgccgaaagagcgctgtaag
caaaccattaacttggtgcccggtgatgagtttgtactggcgaacgacgaagaagccgaa
accgatgcgctgcgtgccaagcaccgctgtgagaagtgtggcaccgccatggatgcctac
tttatcgatgataagcgcaagctccatgtgtgtggccaaaaccccgactgtgatggctat
gagctggaagaagggcaatttaagcttaaaggctacgacggtcctgtgattgaatgcgat
cgctgtgaagctgaaatgcagctgaaaaatggccgcttcggtaagtacatggcctgtact
aatgaagagtgtaaaaatacccgtaagatcttgaaaaatggcgacgtggcaccgcccaaa
gaagatccggtacatttacccgaattaccttgtactcagtctgacgcctattttgtgttg
cgcgatggcgcggccggtatctttatggcggccagcaactttcctaaatcgcgtgaaacc
cgtgcgcccttagtggaagagctggtgcagtttaaagaccgactgtcgcctaagttcact
tatttgaccgaggcgcccgttaaggatcccgagggtaacaaagcagtcgtgcgctatagc
cgtaagaataaagagcagtacgtgatgacggaaatagagaaaaaagccaccggctggacc
gcccattatatagatggcaagtgggtacaagctcagaaaggtaagaagtaa
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