Oceanisphaera profunda: CBP31_02050
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Entry
CBP31_02050 CDS
T04856
Name
(GenBank) lipid ABC transporter permease/ATP-binding protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
opf
Oceanisphaera profunda
Pathway
opf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
opf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CBP31_02050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
opf02000
]
CBP31_02050
Enzymes [BR:
opf01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
CBP31_02050
Transporters [BR:
opf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CBP31_02050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
DEAD
APS_kinase
RsgA_GTPase
AAA_16
AAA_29
Zeta_toxin
AAA_30
nSTAND3
AAA_25
AAA_15
6PF2K
AAA_18
MMR_HSR1
DUF87
Motif
Other DBs
NCBI-ProteinID:
ART81560
UniProt:
A0A1Y0D204
LinkDB
All DBs
Position
complement(472299..474050)
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AA seq
583 aa
AA seq
DB search
MSQDAHISSWPVLKRLLGYVKDRKLGLLMAVIGMVGYAAVNTAFISAVKPLIDDGLTGQD
PAFLKMMPFFILGMFFLQGLFSFMSSFCMAWVGNHVVLSLQQQVFGKLMAMPVAFFDRHN
SGNLLSKVTYDASQVSSAASSTLVTLVREGATVIGLLIMMFYYSWQLSLVFFIVGPIVGV
MIAIISRRFRRLSRGMQDAMGNITSSTEQMLKGHKEVLMFNGQKVEADRFHGVSNAVRQQ
NMKMVATNATGTSLVQLIASTALAALVFMANVDGMQDNITPGTFIAVLGAMLMLMRPLKS
LTQLNSSYQRGIAASQSLFGLLDADGETDTGTRSLTRATGNLEFAGVSFTYPTKEAPALK
DVSFSLTPGKTIALVGRSGSGKSTIASLLTRFYDISQGEILLDGVDLREYKLSDLRRQFA
LVSQQVHLFNDSIANNIAYAAEGEYSREQVIAAAKVAYADEFITKLPQGYDTVIGENGAS
LSGGQRQRIAIARALLRNAPLLILDEATSALDTESERHIQAALDELRKDRTAIVIAHRLS
TIESADEILVIDEGRVVERGAHTELMAQQGVYAQLRSIQFGEQ
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaagatgcacatatttcttcatggccggtgcttaagcgattattgggttatgta
aaggatcgcaaactcggtttgttgatggccgttattggcatggtgggttatgcagctgtg
aataccgcctttatttctgccgtaaaacccctgattgacgatggcctcaccggtcaagac
cccgctttcttaaagatgatgccgttttttatcttgggcatgttttttctccaaggcttg
ttttcttttatgtccagtttttgcatggcctgggtaggtaaccatgtggtgctctccttg
cagcaacaggtgtttggcaagttaatggccatgccggtagctttttttgatcgccacaac
agtggcaacttattatctaaagtgacgtatgacgcttcgcaagtgtcttctgcggccagc
tctaccttggtaactttagtgcgtgagggcgccaccgtgattggcctgctcatcatgatg
ttttactactcttggcagttgtcactggtgttttttatcgtggggccgatagtcggcgtg
atgatcgccattatcagtcggcgctttcgccgcttaagccgtggtatgcaagatgccatg
ggtaatatcaccagcagtaccgagcaaatgctcaaaggccataaagaagtattgatgttt
aatggccaaaaagtggaagcagaccgctttcatggggtcagtaatgcggtgcgccagcaa
aacatgaagatggtggccaccaatgccactggcacctctttggtacaattaatagcttct
accgctttggcagccttggtttttatggccaatgttgatggcatgcaagacaacattacc
cccggtacttttattgcggtattaggcgccatgttgatgctaatgcggccattaaagagc
ctgacccaacttaactcttcttatcaacggggtattgccgccagccaaagcttgtttggt
ttgctggatgccgatggcgaaaccgataccggcacgcgcagcttaacgcgcgccaccggc
aatctggagtttgctggtgtgagctttacttatcccaccaaagaagccccagccctaaaa
gatgtcagctttagcttaacgcccggcaaaactatcgccttggtgggccgttctggctca
ggtaaaagcaccatcgccagcttattaacgcgcttttatgatattagtcagggcgaaata
ctgctcgatggcgtggatctgcgtgagtacaaattaagcgacttgcgccgccagtttgcg
ctggtctcgcaacaggtgcatttatttaacgacagcatcgccaacaatattgcctacgcc
gcagaaggtgagtacagccgtgagcaagtgatagcggcggccaaagtggcttatgccgat
gaatttattactaagctgcctcaaggctacgacactgtgattggggaaaatggcgccagt
ttatccggcggtcaacgccagcgcatcgccattgcgcgcgccttgttgcgcaatgcgccg
ttacttatcttggacgaagctacctcggcgctggacaccgaatctgagcgccatattcag
gcggccttggatgaattgcgcaaagacagaactgctattgtcatcgcccaccgtttatca
accatagaaagcgccgatgaaatcttggtgatagacgaaggccgcgtggtggagcggggt
gctcacaccgagctaatggcccaacaaggcgtgtatgcccaacttagaagcattcaattt
ggcgagcaataa
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