Oceanisphaera profunda: CBP31_03170
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Entry
CBP31_03170 CDS
T04856
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
opf
Oceanisphaera profunda
Pathway
opf03030
DNA replication
opf03430
Mismatch repair
opf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
opf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CBP31_03170
03430 Mismatch repair
CBP31_03170
03440 Homologous recombination
CBP31_03170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
opf03032
]
CBP31_03170
03400 DNA repair and recombination proteins [BR:
opf03400
]
CBP31_03170
Enzymes [BR:
opf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CBP31_03170
DNA replication proteins [BR:
opf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CBP31_03170
DNA repair and recombination proteins [BR:
opf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CBP31_03170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ART81747
UniProt:
A0A1Y0D3F5
LinkDB
All DBs
Position
complement(716489..719959)
Genome browser
AA seq
1156 aa
AA seq
DB search
MSTPFIHLRVHSDFSMVDGVAKIAPINLRAKELGYPALALTDQMNMCGLVRFYGDSHRKG
LKPIIGTDIWVQSEELGEQLFRLTLLAMNNAGYQNITRIISAAFERGHVQHRPLVDKTWL
AEFNEGVIVLSGGREGDVGTSLLKGNEELVNECLGFYQTHFSDRFYLELQRTERTDEETY
LHMAVALAEREQIPVVATNEVVFLDKSDFDAHEIRVAIHDGFTLDDKRRPRRYSPEQYLK
SAAEMAELFSDIPEALENSVEIAKRCNVTVRLGEYFLPDFPTGDMSIEDFLVKCSADGLE
DRLNFLFPDEKVRAEKRVEYDERLKIELDVINQMGFPGYFLIVMEFIQWSKDNGIPVGPG
RGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDIDFCMDRRDEVIDHVAEL
YGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVERISKLIPMDPGMTLTKAFEMEPKL
PEIYDQDEEVKALIDMARQLEGTIRNAGKHAGGVVIAPTRITDFAPLYCDEHGQNPVTQF
DKDDVEEAGLVKFDFLGLRTLTIIDWALAMINPKLEAQGLPIIDIAAIPMDDPACFKLLK
RYETTAVFQLESRGMKDLVKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREAV
SYPDETWQHESLKTTLEPTYGIILYQEQVMQIAQVLAGYSLGGADLLRRAMGKKKPEEMA
KQREGFEAGAVANGIDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHYPAE
FMAAVMTADMDNTDKVVTQVDECQRMGLTLLPPDVNSGLYRFTVNEQGAIVYGIGAIKGV
GEGPIESILAARVDGPFRDLFDFCNRVDLKKLNKRVMEKLVLAGAMDRLGPHRASLMATL
PEAMKAAEQHARAEALGQSDMFGVLIEEEHTEHAFVDVPHWPDNVWLDGERDTLGLYLTG
HPINQYAKELRQYTSGRLCDLQATSRDKTTTAAGLVIAARVMTTKRGNRMGILTIDDKSG
RLDVTLFSDALERYESLLEKDKILVISGQVSFDDFNGGLKMSAREVLEMSDARERFARGL
ALNINHSQIDQHFFSQLLDILSPVRAGVCPVRVTYYRPGARAQLMLGTEWRVTPTDEMLA
SLKQLLGPDKVELLFE
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgccctttatacacctgcgcgtacattctgacttttctatggtggatggcgtg
gccaaaatcgcgcccataaaccttcgtgccaaagagttaggctatcccgcactcgcgctc
actgaccaaatgaacatgtgcggcttagtgcgcttttacggcgacagccatcgcaaaggt
ttaaagcccattattggcaccgatatctgggtgcaaagtgaggagctgggcgagcaatta
tttcgcctcaccttgctggccatgaacaacgccggttaccaaaacattacccgcattatt
tctgccgcctttgagcgtggccacgtacagcacagacccttagtagataaaacctggttg
gcggaatttaacgaaggcgtaattgtgctctccggcgggcgagaaggagatgtgggtacc
agcttattgaaaggtaatgaggagctggtcaatgaatgtttagggttttatcaaacccat
ttttccgatcgtttttatctggaattacagcgcaccgagcgcaccgacgaagaaacttac
ctgcatatggcggtggccttggccgagcgggaacagatcccagtggtcgccaccaatgaa
gtggtatttcttgataaaagcgattttgacgcccatgaaattcgggtggccattcacgac
ggctttacgctggatgataagcgccgcccacgacgctacagcccagagcagtatctaaaa
agcgccgccgaaatggcggagttattctcggatattcccgaggcgctggaaaacagcgtc
gagattgccaagcgttgtaacgttaccgtgcgcttgggcgaatacttcttgccggacttt
cccaccggcgacatgagtatcgaagacttcttggttaaatgctccgcagatggcttagaa
gaccgactcaatttcttatttcccgatgaaaaagtacgcgccgaaaagcgcgtggaatac
gacgagcgcttaaaaatcgagctcgacgtcatcaaccaaatgggcttccccggttatttc
ttgatcgtgatggaatttatccagtggtcaaaagataacggcattcccgtgggccctggg
cgaggttcgggcgccggctctttggtggcctatgcattaaagatcaccgacttggatccg
ctggaattcgacttgctgtttgagcgcttcttgaatcctgagcgggtatctatgcccgac
ttcgatatcgacttttgcatggaccgccgcgatgaagtgatcgatcacgtggccgagtta
tacggccgcgatgcggtgagtcagatcattaccttcggtaccatggccgccaaagcggta
attcgcgacgtaggccgcgtgctgggccacccttatggttttgtagaacgcatctctaag
ctgatccccatggatccgggcatgacgctgaccaaagccttcgagatggagcctaaatta
ccggaaatttacgatcaagacgaagaagttaaagccttgattgatatggcgcgccagctt
gaaggcaccatacgtaacgccggtaagcacgcgggtggcgtggtcattgcaccgacccgc
atcaccgattttgcgcccttgtactgtgatgagcacggccaaaacccggttacccagttc
gataaagatgatgtggaagaagcgggcttagtgaagttcgacttcttgggcctgcgcacg
ctcactatcatcgactgggcactggcgatgattaaccccaagctcgaagcgcaggggttg
cccataatcgatatcgccgccatccccatggatgacccggcgtgttttaaactcttaaaa
cgctacgagaccacggcggtattccagcttgaatctcgcggcatgaaagacttggttaag
cgcctgcagccagactgtttcgaagacatgatagcgctggtagcactgtttcgaccgggg
ccgctgcagtctggcatggtagataactttatcgaccgtaagcacggccgtgaggcggtg
tcttatccggatgaaacctggcagcacgagtccctgaaaaccacgctcgaacctacctat
ggcatcattctctatcaagagcaggtgatgcaaatcgcccaggtgctggcgggctattcg
ttgggtggcgctgacttattacgtcgtgccatgggtaagaaaaagcccgaagaaatggcc
aagcagcgcgagggctttgaagcgggagccgtggcgaatggcatagacggcgagttggcg
atgaaaatcttcgacttggtggaaaaatttgccggctatggttttaacaaatctcactct
gcagcttacgcgttagtttcttatcaaaccctgtggctgaaaacccattatccggcggag
tttatggcggcggtgatgaccgccgacatggataacaccgacaaggtggtgacccaagtc
gacgaatgtcagcgcatgggcttaaccttgctgccaccggatgtaaactccggcctgtat
cgctttacggtgaacgaacaaggcgccatcgtctatggcataggtgccatcaaaggcgtg
ggcgaggggccgatagagtcgattttagcggcacgcgttgacggaccatttagagattta
ttcgatttttgtaatcgcgtcgacttaaaaaaattaaacaagcgggtgatggaaaagctg
gtgctcgccggcgccatggaccgcttagggccgcatcgtgcctcactgatggccacgcta
cccgaagccatgaaggccgctgagcaacacgcgcgagcagaagcgctcggccaaagcgat
atgtttggcgtactgatagaagaagagcacactgagcatgcctttgtcgatgtgccacat
tggcctgataatgtgtggcttgatggcgagcgcgatacgctgggcttatatttaaccggc
cacccgattaatcagtacgccaaagaattacgtcaatacaccagcgggcgcctgtgtgat
ttacaagccaccagccgtgataagaccactacggctgcgggcttggtgattgccgcgcgg
gtgatgaccaccaagcgcggcaaccgcatgggcatcttaaccatcgacgataaatccggt
cgattggacgtaacgctgttctccgatgcgctggaacgctatgagtctttgctagaaaag
gataaaatcctcgttatcagtggccaagtcagctttgatgactttaatggcggccttaag
atgtcggcacgggaagtgctagagatgagtgatgcgcgcgagcgatttgctcgcgggctt
gcgttaaatattaatcacagccaaatagatcaacatttttttagccaattgttggacata
ctcagccccgtacgggcgggcgtgtgtccggtgcgagttacttattatcgaccaggagcg
cgggcgcagttaatgcttggcaccgagtggcgggttacgcccaccgacgagatgttagca
tcattaaaacaactgctgggtccggataaagtcgaactactttttgaatag
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