Oceanisphaera profunda: CBP31_03715
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Entry
CBP31_03715 CDS
T04856
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
opf
Oceanisphaera profunda
Brite
KEGG Orthology (KO) [BR:
opf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
opf03400
]
CBP31_03715
DNA repair and recombination proteins [BR:
opf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
CBP31_03715
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
SLFN-g3_helicase
AAA_30
AAA_16
DZR
AAA_22
AAA
RctB_central
Protoglobin
T1R_D3-like
UPF0547
zf-tcix
Motif
Other DBs
NCBI-ProteinID:
ART81839
UniProt:
A0A1Y0D2V5
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Position
850640..852394
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AA seq
584 aa
AA seq
DB search
MFTLRPYQQEAVERTLTYFRRHDDPAVLVLPTGAGKSLVIAELARLARGRVLVLAHVKEL
VEQNHAKYQSYGKEAAIFSAGLGKKEAHTQVVFGSVQSVARNLEAFSQFSLVIIDECHRV
SDDDDSQYLQVVNHLHESNPKLKVLGLTATPYRLGMGWIYQTHYHGFVRSRKPRFFKHCL
FELPLRLMIKQGYLCPPDIVDAPVVHYDFSRLYEQGLFTEQALEQELARQPRVTPHIVQQ
IQDYAVERVGVMVFASTVRHAAEVAGLLPPKQTALITGDTPGPERDEIIRRFKARELKFL
VNVSVLTTGFDAPHVDVIALLRPTQSVALYQQIIGRGLRLSPDKTNCLVLDYAGNNMDIF
APDVGEPRPNPDTTQVQVLCPACGFANIFWGKTDEQGNVLEHFGRRCQGLFSHADEPEEL
GEPCGYRFRFKSCPQCLAENDIAARQCHDCGCVLVDPDKKLKEALALKDALILRCAGMSL
DEGSGKFGPALKATYYDEDGTELQQWYAFDAKGKTGRFYLEFVRPHWPAPGFEPELNNLA
DVLALAEKFRHPDFVIARKHKKGWRVKETLFDYQGRFRLANALS
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccctgcgcccttatcagcaagaggcggtggagcgcacgctcacctactttcgc
cgccatgatgaccctgccgtattagtgctgcctaccggtgcgggcaagagcttggtgatt
gccgagttggcacgcctcgcccgcggccgtgtcttggttttggcgcacgtgaaagagctg
gtggagcaaaaccacgctaagtatcaaagctacggtaaagaggcggcgatattctcggca
ggcctcggtaaaaaagaggcccacactcaggtggtgtttggctctgtgcagtcggtggcg
cgcaacttggaggcttttagccaatttagcttagttatcatcgatgaatgccatcgggta
tccgatgatgacgacagccaatacttgcaagtggtgaatcatctgcacgagtccaatcct
aagctcaaagtgctgggcctaacggcgacgccctatcgcttaggcatgggctggatttat
caaacccattatcatggttttgtgcgcagccgtaagccgcgtttttttaagcattgctta
tttgagctgccgctgcggctgatgatcaaacaaggttatctttgcccgccagatatcgtt
gatgcacctgtggtgcattatgatttttcaaggctctatgaacagggcttatttactgag
caagcattagaacaagagctggcgcgccaacccagagttaccccacacatagtgcagcaa
atccaagactatgcagtggagcgtgtgggcgtgatggtgtttgccagcacggtgcgccac
gcggcagaagtagctgggctgttaccgccgaagcaaaccgccctgatcactggcgatacc
ccagggcctgagcgcgatgagattattcgccgctttaaagcccgcgagctgaagttttta
gtgaacgtgtctgtgctgactaccggctttgatgcgccgcacgtggatgtgattgccctg
ctgcgccccacccaatcagtggcgctatatcagcaaatcattggtcgaggcttgcgccta
agccccgataaaaccaactgtttagttttggattacgcgggcaataatatggacattttc
gcccccgatgtgggcgagcccagacccaatccggataccacgcaggtgcaagtgctgtgc
ccagcttgtggctttgccaatattttttggggtaaaaccgacgaacaaggcaatgtgctg
gagcactttggccgtcgctgtcagggtttattctctcatgcagacgagccagaggaatta
ggcgagccttgcggttatcgttttcgctttaaatcttgcccgcaatgcttggctgaaaat
gacatcgccgcccgccaatgccacgactgcggctgtgtgttggtggatcccgacaagaag
cttaaagaagcgctggcgctgaaagatgcgcttatcttacgctgtgccggcatgagctta
gatgagggctccggaaaatttggcccagccctcaaagccacctattacgatgaagatggc
actgagctacagcaatggtatgcttttgacgctaagggcaagacagggcgtttttatctg
gaatttgtacgcccccactggcccgcgccgggctttgagcctgagcttaataacctagcc
gacgtgctggcactggctgaaaagtttcgccacccagactttgtaatagcccgtaaacat
aaaaaaggctggcgtgttaaagaaaccctgtttgattaccaaggccgctttcgactggcg
aatgctttgtcttag
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