Oceanisphaera profunda: CBP31_04880
Help
Entry
CBP31_04880 CDS
T04856
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
opf
Oceanisphaera profunda
Pathway
opf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
opf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CBP31_04880
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
opf01007
]
CBP31_04880
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
opf03016
]
CBP31_04880
Enzymes [BR:
opf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
CBP31_04880
Amino acid related enzymes [BR:
opf01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CBP31_04880
Transfer RNA biogenesis [BR:
opf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CBP31_04880
Prokaryotic type
Other AARSs
CBP31_04880
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
AsnA
Motif
Other DBs
NCBI-ProteinID:
ART82039
UniProt:
A0A1Y0D3F6
LinkDB
All DBs
Position
complement(1127011..1128498)
Genome browser
AA seq
495 aa
AA seq
DB search
MTDQLLDENKLIAERRAKLDHIRKDCPANGHPNNFQREHLAADLQSEFGELDKEALIELN
KTVSVGGRIMAKRGPFLVLQDMSGRIQAYTTKGAQAIIKDQYIGLDIGDIIGVTGILHKS
GKGDLYVSMDNFQLLTKALRPLPEKFHGLTDQETRYRQRYLDLITNEDSRHTFQVRSQVM
ASIRQFMNGHGFMEVETPMMQVIPGGASARPFITHHNALDMDMYLRIAPELYLKRLVVGG
FEKVFEINRNFRNEGLSPRHNPEFTMMEFYWAYANYQDLMDFTEEMLRTVTTEVLGSSTV
QYGEETFEFGQPFARLGMKDSILKFNPEVTAEQLSTLENALEVAKDLKIKTEKNWGLGRV
ITEIFEETVEHRLIQPTFITEYPAEVSPLARRNDNDPSITERFEFFIGGREIANGFAELN
DAEDQAQRFLDQVNQKEAGDDEAMFFDEDYITALEHGLPPTAGQGIGIDRLVMLLTDSHT
IRDVILFPTLRPSAK
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgacagaccagttactagacgaaaataagctgatcgccgagcgccgtgccaagcttgat
cacattcgcaaagattgtccggctaatggccacccaaataattttcagcgcgagcatttg
gctgccgacttgcaaagcgagtttggtgagcttgataaagaagccttgattgagctgaat
aaaaccgtgtctgtgggcggccgtattatggctaaacgcggtccgtttttagtgctgcaa
gatatgagcggtcgcattcaggcttacaccactaaaggtgcgcaagccattattaaagac
cagtacatcggtttagacatcggcgatattatcggcgtgaccggtattttgcataagtct
ggcaaaggcgatttatacgtgagcatggataacttccaactgctgactaaagcgctgcgc
ccactgcctgagaaattccacggtttaaccgaccaagaaacccgctatcgccagcgctat
ctggatttgatcaccaatgaagactcgcggcatacctttcaggtgcgctcacaggtgatg
gcttctattcgccagtttatgaatggccacggctttatggaagtggaaacacccatgatg
caagtgatcccaggcggcgcttcggctcgtccgtttatcacccatcacaatgcgttggat
atggacatgtatctgcgtattgcgcctgagctgtatttgaagcgcttggtggttggcggt
tttgagaaagtattcgaaattaatcgtaacttccgaaatgaaggcctgtcgccgcgtcat
aacccagaattcaccatgatggaattctactgggcttatgccaactatcaggatctgatg
gacttcaccgaagaaatgctgcgcaccgtcaccacagaagtgctgggtagctcaaccgta
caatacggtgaagaaaccttcgagtttggtcagccatttgcgcgcttgggcatgaaagac
tcaatcttgaaatttaatccagaagtaacggctgagcaactgagcaccttagaaaatgcg
cttgaagtagccaaagacttaaagatcaagaccgagaaaaactggggcttgggccgtgtg
atcaccgagatcttcgaagaaaccgtagagcaccgtttgatccaacctactttcattacc
gaatacccagcagaagtatcaccgctggcgcgtcgtaatgataacgatcctagcattacc
gagcgcttcgagttctttatcggcggtcgtgaaattgctaatggttttgccgagctgaat
gatgcagaagatcaggcgcagcgcttcttagatcaagtaaaccaaaaagaagccggcgac
gacgaagccatgttcttcgacgaagactacatcaccgccctcgagcacggcctgccgcct
actgccggccaaggtatcggcatcgatcgcttagtgatgttgttaacagactcacacacc
atacgtgacgtgatcctgttcccaacactgcgccccagcgctaagtaa
DBGET
integrated database retrieval system
