Oceanisphaera profunda: CBP31_05600
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Entry
CBP31_05600 CDS
T04856
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
opf
Oceanisphaera profunda
Pathway
opf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
opf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CBP31_05600
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
opf02000
]
CBP31_05600
Transporters [BR:
opf02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CBP31_05600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_22
SMC_N
TniB
AAA
AAA_16
RsgA_GTPase
AAA_5
ATP-synt_ab
NACHT
MMR_HSR1
NB-ARC
Mg_chelatase
AAA_29
AAA_18
AAA_33
nSTAND3
RNA_helicase
AAA_14
NPHP3_N
Septin
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ART82166
UniProt:
A0A1Y0D4Q0
LinkDB
All DBs
Position
complement(1294939..1296081)
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AA seq
380 aa
AA seq
DB search
MTRAISIEQVRGAAPELNASKSAAPLLQLENLAQHFTLGGGLLRRGQTLYAVDGVSFTLA
AGKTLGLVGESGCGKSTLARSLLKLQQPSSGRIHFDGQDITDYSARQMRPLRQQMQLVFQ
DPQESLNSRHTIATILQEPFVIHGIGTAQERQVWAGELLQRVGLPVSALNRYPHEFSGGQ
RQRIGIARAMALKPKLLVCDEAVSALDVSVQSQILNLLLSLQQEYQLAILFIAHNLSVVK
HISDHIAVMYLGRIIELAPSDELYAQALHPYTQALLAAIPEPDPRRRKVPLMLQGEPPSP
ANPPSGCHFRTRCPYVGERCINEVPPLLPAAPTLGAQSLLNIGPAGGEAHHVACHFHREI
MSGERLPQNLESCDIITSLI
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaccagggccataagcatcgagcaagtgcggggagctgccccagagctgaacgcatca
aaatcagccgcgcctctcttgcagctagaaaacttagcccagcacttcacgctgggtggt
ggtttattacgtcgcggccaaaccttatatgcagttgatggcgtcagctttacgctggcc
gctggcaaaacactggggctggtgggtgagtcgggctgtggtaagtcgacgctggcccga
tccttactcaagttacaacaacctagctcaggccgcattcatttcgatggtcaagatatt
accgactactctgcgcgacaaatgcgccctttacgccagcaaatgcagctggtgtttcaa
gaccctcaagaatccttaaacagtcgccacaccatagcgactatcctgcaagagccgttt
gttattcatgggatcggtacggcgcaagagcgccaagtctgggccggtgaattattgcag
cgagttggtttgccagtttcggcgctcaatcgttatccccacgaattttctggcggccaa
cgacaacgcattggcatagcgcgcgccatggcgctcaagcccaagttattagtgtgtgat
gaggccgtgtccgcattggatgtgtcggtacaatcgcagattttgaacttgttgctctcg
ctgcagcaagaataccaactggcgatcttgtttattgcccacaatctttcggtagtgaag
cacatctccgatcatatcgccgttatgtacttagggcgcatcattgagctggcacccagt
gatgagttatacgcccaagccttgcatccttatacccaagccttgttggccgcgatccca
gagccggatcccagacggcgcaaggtgcccctgatgctacagggcgagccaccgtcaccg
gccaacccgccatcggggtgtcattttcgtacccgttgtccttatgtcggtgagcgttgc
atcaatgaagtgccacctttactgccagcagcaccgacgcttggcgcacaatccttatta
aacatagggccagctggcggtgaagcgcatcacgtcgcctgtcactttcatcgagagatc
atgagtggtgaacgcttacctcagaatttagagagctgtgatattattacgtctcttata
tag
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