Oceanisphaera profunda: CBP31_05830
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Entry
CBP31_05830 CDS
T04856
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
opf
Oceanisphaera profunda
Pathway
opf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
opf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CBP31_05830 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opf03019
]
CBP31_05830 (pcnB)
Enzymes [BR:
opf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CBP31_05830 (pcnB)
Messenger RNA biogenesis [BR:
opf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CBP31_05830 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
ART82205
UniProt:
A0A1Y0D531
LinkDB
All DBs
Position
1352875..1354332
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AA seq
485 aa
AA seq
DB search
MTATGQQTLAKGHARCPIFSQIAGFCKKLLNRTPQARAEQETLPLQPVVLTRDQHGISRQ
QISDNALKVLYRLNKSGFEAYLVGGGVRDLLLGRQPKDFDIATSATPDQVKQLFSNCRLV
GRRFRLAHILFGRDVIEVATFRGHHHQVNNNKNASDQSSEGMLLRDNVYGTIEEDAERRD
FSVNALYYNIADFSVVGFSNGLKDLENRSLELIGDPETRYREDPVRMIRAVRFSAKLGLT
ISPRTAAPIRDLAPLLGDIPPARLFEETLKLLLAGYGLETYHQLQRYDLFAPLFPEAADV
MGQDDNDYHRFLELALINTDERIAKDMRVTPAFLYAALLWGPVETRTQQFMHEGGLNYYD
AFLLAMDEVLGRQVKSVAIPRRFSSVVRDIWMLQDRLTKRSGKRPHRLLEHPKFRAGYDF
LLLRAELDPKLKELADWWTEFQVANPVDRQQLSRAAQARHNQFGGEDPAKARKRPRRRPR
KKKEA
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
ataaccgcgacaggtcaacagaccctagctaaaggccatgcgaggtgtcctattttttcc
cagattgctggcttttgtaagaagctactaaaccgaactccacaagcccgagccgaacag
gagacgctaccgttgcaacccgtggtattaacacgcgaccaacacggtatatcacgccaa
caaatcagtgataacgcgctcaaagtgttgtatcgcctgaacaaatctggatttgaagcc
tacttagtgggcggcggtgttcgtgatttactcttgggtcgccagcccaaagactttgat
attgccaccagcgcgacgcccgaccaggttaagcagttatttagtaactgtcgcttggtg
ggtcgtcgttttcgcttggcccatattttatttggccgtgatgtgatcgaagtggcgacc
tttcgtggtcatcatcatcaggttaataacaataagaatgcgtcagaccaatcctctgag
ggcatgctgctgcgtgacaacgtctacggcaccatagaagaagatgcggagcgccgcgac
tttagtgttaacgctttgtattacaatattgctgactttagcgtggtgggtttttctaat
ggtcttaaagacttagaaaaccgcagcttagagctgattggtgatccggaaacccgctac
cgtgaagatccggtgcgcatgatccgcgcggtacgcttttctgcgaagctgggcttaacc
attagcccgcgcaccgccgcacccatccgtgatttagcgcccttgctgggtgatattccg
cctgcacgtttgttcgaagaaacacttaagttattgctggccggttatgggcttgaaacc
taccaccaattacagcgttatgacttgtttgcgcctttgttccctgaagccgccgatgtg
atgggccaagacgataacgattatcatcgttttctcgaactggcgctgatcaataccgat
gaacgtatcgcaaaagatatgcgtgttacgccagctttcttgtatgcagcgctgttatgg
ggaccggtagaaacccgcacccaacagtttatgcatgaaggcggccttaactattacgat
gctttcttgctggccatggatgaagtgctgggtcgccaagtgaagagcgtagcgatcccg
cgtcgctttagctcggtagtacgtgatatttggatgttacaagaccgcttaaccaagcgc
agcggcaaacgcccgcatcgcttactagagcatcctaagtttcgtgccggttatgacttc
ttgttattacgcgccgagctcgaccctaagctgaaagagctagccgattggtggaccgag
tttcaagtggcaaacccagtggacaggcagcagttatctcgcgccgctcaggcccgacat
aatcagtttggtggcgaagacccggctaaagcgcgcaagcgcccacgtcgtcgcccgcgg
aagaaaaaagaagcatga
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