Oceanisphaera profunda: CBP31_06070
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Entry
CBP31_06070 CDS
T04856
Name
(GenBank) poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA
KO
K11935
biofilm PGA synthesis protein PgaA
Organism
opf
Oceanisphaera profunda
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PgaA_barrel
TPR_19
TPR_14
Porin_3
ANAPC3
TPR_4
Motif
Other DBs
NCBI-ProteinID:
ART82243
UniProt:
A0A1Y0D3Z1
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Position
complement(1402799..1405231)
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AA seq
810 aa
AA seq
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MGLSILRSGCLVLVMVLHAMPVVAADFSYDNLVIQARSGNTVPLLTWLERNSRQLNANMR
ADWLQVANWAGDDQQVVTVWEGFSPIVRNSIPARGALAAASSYRNLKLWQQSLAIWHEQL
RLNPDLQDARAGWIMSLSDAGEKQQARQQAERFVQENGSYLSHQVLLYTIQGSGNGWDEL
FALTRLQDLHQDTDQSDIDTKLMQAMAAKLVSKPALQFGKQHTSDAAVLRHLELDQVAEM
VRMAHTHSRGEQDKYWIADRALARYRQLLQSWQGLPDAGADIRRARIDRLGAYVARNRHK
DAINEYENLQKQDPAMPTYAKRWAASAYLSNRQPDKAYRILHELFGTTPAFKLRPEDAQE
FFFAALESDHLDEAGLIASDIMANTPYHRYDYGSPTPQPNDNWLSGQVLQGHYLQKVNRL
DAAEQHNQKLSDSGPGNQGLRINLAETLLARGLPRAAERQLKIGEVLEPYSLILERQQAY
VAQDLQEWGQFDLLVKDVVQRSPNEPATQQLARAHQVENLSEFRLTGSKGISSDNPISGS
QDLNFNSALYGPRMYEHWRPFIGFDYAAGRFDEGKGSKRIQAIGAEYSTRDNWGELELSN
HNAVSENKTGARFSYWHDFNDNWRVGTNIERLARDTPLRAIRSGVTSNQVGGYVRWYENE
RRQYQFSVAASDFSDDNQRINVAITGVERLYTRPYLFIDLLPTIGMSSNSQQDGAYYSPE
QDLSIAPTLFIDHVLYRRYDQVWRQQLVLGAGYYWQEDFGGGLSTTAGYGQRYETNSVFD
VGAMLLWNKQPYDGQREHDLSLVFDVNFKF
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgggattaagtattttgcgttcaggttgcttggtgctggttatggtattgcatgcaatg
cctgttgttgccgctgactttagctatgataatttggttattcaggctaggtctggaaat
actgtacctttattaacttggttagaacgcaatagccgtcagcttaatgcaaatatgcga
gccgactggctgcaggtcgccaactgggcgggtgatgaccaacaggtggtcacggtctgg
gagggtttttcgccaatcgtgcgcaacagcatccctgcgcgcggtgcgttagcggctgcc
agctcttatcgcaacttaaaattatggcagcaatctcttgccatttggcatgagcaactg
cgtcttaatcctgatctacaggatgctcgcgcgggttggataatgagcctttccgacgcg
ggtgagaaacaacaggcccgccagcaagcggagcgatttgtgcaggaaaatggcagttat
ctcagccaccaagtactgctttatactatccaagggagtggcaatggttgggatgagctg
tttgccttaactcggttgcaagatctgcatcaagacacggatcagtcggatatagacact
aagctgatgcaggccatggctgccaagctggtgtcaaaacccgcacttcagtttggtaaa
caacatacatcggacgccgccgtgctgcgtcatttggagctggaccaagttgccgagatg
gtacgcatggcccacacccatagtcgcggtgagcaggataaatactggattgcagaccgc
gcgctagcacgctatcgccaattgctgcaaagctggcaagggttgcctgatgcaggtgca
gacattcgtcgcgcacgtattgacaggcttggcgcctatgtagcgcgcaatcggcataag
gacgcgatcaacgaatacgaaaatttgcaaaaacaggatcctgcgatgcctacttatgct
aagcgctgggcggcaagtgcttacttgtctaatcgccaaccggataaggcctatcgtatc
ctgcacgaactgttcggcaccacacctgcgtttaagttgcgaccggaagatgcgcaagaa
tttttctttgcagcattggaaagcgatcatcttgatgaagcaggattgatcgcgagcgat
ataatggccaacaccccttaccatcgctatgactacggctcgcccacaccccaacccaac
gataactggttatctggccaagtattacaaggtcactatctccaaaaggtgaatcgcctc
gatgcggcagagcagcataaccagaagctgagtgatagtgggcctggtaaccaaggcttg
cgcattaatcttgcggaaactttattagcgcgcggtcttcccagagccgccgaacgacag
ctgaaaattggcgaggtgttagagccctacagtctgatcttagagcgccaacaggcttat
gttgcacaagacttgcaagagtgggggcagtttgacctgctggttaaagatgttgtgcag
cgtagtcccaatgaaccggctacgcagcaactggcgcgtgcgcatcaggttgaaaactta
tctgaatttaggctcactggcagtaaaggtatttcctctgataacccgataagtggttcg
caagacctgaattttaattccgcactttatggcccgcgtatgtacgaacattggcggccc
tttattggttttgactatgcagccgggcgctttgacgaaggtaagggtagcaagcgtatt
caagctataggagcggaatatagcactcgcgacaattggggtgagctggagctgtctaac
cataatgccgttagcgagaataaaaccggtgcgcgtttttcttactggcatgactttaat
gataactggcgtgtgggtactaatattgagcggttagcccgtgacaccccactgcgggcg
atccgcagtggggtgacatccaatcaagtaggcggttatgtgcgttggtatgaaaacgaa
cgtcgtcaataccaatttagtgtggctgcgagtgatttttccgacgataaccaaagaatc
aatgtggctatcacaggtgtagagcgtctgtacactcggccctatttgtttatagatctg
ctgccgactatcggcatgagtagcaacagccagcaggatggcgcctattacagccctgaa
caagatctgagtattgcgcccaccctgtttatcgatcatgtgttgtatcgtcgttatgac
caagtttggcgccaacaattggtactgggcgctggttattactggcaggaagattttggt
ggcggtttaagtactaccgcaggctacgggcagcgttatgagaccaacagtgtatttgat
gtgggcgctatgctgctttggaacaagcaaccctatgacggccagcgtgagcatgattta
agtctggtatttgatgttaactttaaattttga
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