Oceanisphaera profunda: CBP31_06705
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Entry
CBP31_06705 CDS
T04856
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
opf
Oceanisphaera profunda
Brite
KEGG Orthology (KO) [BR:
opf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
opf03021
]
CBP31_06705
Transcription machinery [BR:
opf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CBP31_06705
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
Trigger_C
Motif
Other DBs
NCBI-ProteinID:
ART82347
UniProt:
A0A1Y0D556
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Position
complement(1543960..1544817)
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AA seq
285 aa
AA seq
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MTTDFQRDFSLVPQGSLEAYIQAVNTIPVLSAEQEKSLAERLFNDGDLSSARQMIMSHLR
FVVHIARGYSGYGLPQADLIQEGNIGLMKAVKRFDPAVGVRLVSFAVHWIKAEIHEYVLR
NWRVVKVATTKAQRKLFFNLRKSKKRLGWFNQAEVAMVAENLGVLPAEVVEMESRMSAQD
PAFDLSSDDDDRDTNFSPVQYLQDNSSDVAHQVEAENWEQTSNRRLRAALATLDERSQHI
IQARWLDEEEKITLQVLADEYGVSAERIRQLEKSALKKLKMAMDS
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgacaacagattttcagcgtgatttttcccttgttcctcaaggtagcttggaagcttat
atccaagcagtcaataccattcctgtgctcagtgccgaacaagaaaaatcactggccgaa
cgactttttaacgacggtgacttgtcttctgctcgccagatgatcatgtctcacctgcgt
tttgtggtgcacattgcccgtggttattccggctatggtttaccacaagcagatttgatc
caagaaggtaatatcggcctcatgaaagccgtgaagcgctttgaccctgcggtcggcgtg
cgcttagtttcttttgcggtgcattggatcaaagccgaaattcatgaatatgtgctgcgt
aactggcgagtagtaaaagtagccactaccaaggcgcagcgtaagttattctttaactta
agaaagtctaagaaacgtttaggctggtttaaccaagccgaagtcgccatggtggcggag
aacttaggggtattaccggccgaggtcgtggaaatggagtcgcgcatgagcgcgcaagac
cccgcctttgacttatcatcagatgatgatgatcgggataccaacttttcgccggtgcag
tatttgcaagataacagctcggatgtggcgcatcaggtagaagccgaaaactgggaacaa
accagtaaccgtcgcttgcgtgccgccttggctaccttggacgagcgcagtcagcatatt
attcaagcgcgctggttagatgaagaagaaaaaattaccttacaagtattagccgatgag
tatggcgtatctgcagagcgtatccgacaattggagaaaagcgcgctgaagaagctgaaa
atggccatggattcataa
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