Oceanisphaera profunda: CBP31_06995
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Entry
CBP31_06995 CDS
T04856
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
opf
Oceanisphaera profunda
Brite
KEGG Orthology (KO) [BR:
opf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
opf03016
]
CBP31_06995
Enzymes [BR:
opf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CBP31_06995
Transfer RNA biogenesis [BR:
opf03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CBP31_06995
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
CSD2
S1
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
ART82400
UniProt:
A0A1Y0D4E2
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All DBs
Position
1604553..1606523
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AA seq
656 aa
AA seq
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MFQNNPLLAQLKQQMRDDLDVKEGMVKGTSKGFGFLEVSEKESYFIPPPHMKKVMHGDHI
TAILRTENDRQLVEPETLIEAGVTTFVARVKWFRDRLNLVPDHPLMNEAIKARAVKGINE
KSLKEGDWVLGELTSHPLKGNGFFANVIEVIAGVDDPNAPWWVVLARNKLTKYAPEDNKD
WQQVPDTLTRRDLTDVPFFTIDAESTLDMDDALSITKLDNGWELLVAIADPTAYVPHNSV
MDKVAAERAFTAYMPGRNIPMLPRTLSDELCSLQEGVERPVICARLFIDNDGKVDEKAEF
FAATMRSHARLSYDNVSNWIDEIGDWQPANDIIAEQIRQMKAFTLTRAAWRTQHAIIFKD
RPDFRFALDADSNVTDILVDYRRIANQMVEESMIAANLACGNWLNERIGTGIFNVHLGFD
SEKMEGLVELLAAHESPFAPETLSTLEGFCALRRWVDARETSYLDSRTRRYQSFAAMSPV
PGPHFGLGLTAYATWTSPIRKYGDIVNHRLIKAILSEQAHEAFIPSEELATHLSDQRRMH
RRAERDIADWLYVRYLKPAVAEGKVFDADIVDVGRGGVRLRLQENGAGVFMPSSLICSNR
DRLECSWDDGRVYLDKATLYELGQTVQIIITEAIEDTRSLIAKPAQPISPVAPQAQ
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaaataaccccctattagctcagctaaagcaacaaatgcgcgatgaccttgat
gttaaagaaggtatggttaaaggtacctctaaaggttttggctttttagaagtcagcgag
aaagaaagctactttattccaccaccacacatgaaaaaagtcatgcatggcgatcacatt
accgccatcttgcgtaccgaaaacgatcggcaactggttgaaccagagaccctcattgaa
gccggtgtcactacttttgtcgcccgcgttaagtggttccgcgatcgcttaaatctggtg
cccgaccatccgctaatgaacgaagccattaaagcccgtgccgttaaaggcattaacgaa
aaaagcttaaaagaaggcgattgggtattaggcgaactgacctcacacccgctcaaaggc
aatggctttttcgccaacgttatcgaagtgatcgccggcgttgacgacccgaacgcgccg
tggtgggtagtattggcccgcaacaaattgactaaatacgcaccagaagacaacaaagat
tggcagcaagtgcccgatacgctgactcgtcgcgatcttaccgatgtgcctttcttcact
atcgacgccgaatcgacgttggatatggatgatgccttgagcatcactaagctcgataat
ggctgggaactactggtcgccatcgccgatcctaccgcctatgtgccccataacagcgta
atggacaaagtggccgccgaacgcgcctttaccgcttatatgcctggccgcaacattcct
atgctgccgcgtaccttgtctgatgagctgtgctcattacaagaaggcgttgaacgcccg
gtgatctgcgcacgtttgtttatcgacaatgacggtaaagtagacgaaaaagccgaattt
ttcgccgccactatgcgctctcatgctcgcctgagctacgacaacgtgtctaattggatt
gacgaaattggtgattggcagccggctaatgacattattgccgagcaaatacgccaaatg
aaggcgttcacgctgacccgtgccgcttggcgcacccagcacgccatcatctttaaagat
cgcccagattttcgcttcgcactcgatgcagacagcaacgtgacagatatcttggtagat
tatcgtcgtatcgccaaccaaatggttgaagagtcgatgattgccgccaacttggcctgt
ggtaactggctaaacgagcgcataggtacaggtatttttaacgtgcacttgggttttgat
agcgagaaaatggaaggcttagtggagctgcttgccgctcacgagtcaccctttgcgcca
gaaacactcagcacgctggaaggtttctgtgccctgcgtcgttgggtagatgcgcgcgaa
acctcttatctggacagccgcactcgtcgttaccagtcgtttgccgccatgagcccagta
ccaggcccgcactttggtttaggcttaacggcttacgctacctggacctcgccgattcgt
aaatatggcgacatcgtcaaccatcgcttaattaaggcgattttgtctgaacaagcccac
gaggctttcatcccgagcgaagagctagcaacgcatttgtcggatcagcgtcgtatgcat
cgccgtgccgagcgcgatatcgccgactggctgtacgtgcgttacttaaagccagctgtg
gccgaaggtaaagtatttgatgcagacatcgtcgatgtaggtcgtggtggtgtgagatta
cgcctgcaagagaacggtgctggggtatttatgccttcatcactgatctgttcgaatcgc
gatcgcttagaatgcagctgggacgatggccgcgtctacttagacaaggccaccttgtac
gagctaggccaaacggtgcagatcatcatcaccgaagccatcgaagacacccgctctttg
atagccaagcctgctcagcctatttcaccggtggcgccacaagcgcagtaa
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