KEGG   Oceanisphaera profunda: CBP31_07800
Entry
CBP31_07800       CDS       T04856                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
opf  Oceanisphaera profunda
Pathway
opf03030  DNA replication
opf03410  Base excision repair
opf03420  Nucleotide excision repair
opf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:opf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CBP31_07800
   03410 Base excision repair
    CBP31_07800
   03420 Nucleotide excision repair
    CBP31_07800
   03440 Homologous recombination
    CBP31_07800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:opf03032]
    CBP31_07800
   03400 DNA repair and recombination proteins [BR:opf03400]
    CBP31_07800
Enzymes [BR:opf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CBP31_07800
DNA replication proteins [BR:opf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     CBP31_07800
DNA repair and recombination proteins [BR:opf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     CBP31_07800
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CBP31_07800
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH_5 Obc1_cap
Other DBs
NCBI-ProteinID: ART82535
UniProt: A0A1Y0D662
LinkDB
Position
1803562..1806300
AA seq 912 aa
MAALPSKPLILVDGSSYLYRAYFASLKAGLRTSDGRPSGAVRVVTNMLRSLHKQFPDSQV
TVVFDAKGKTFRDDLYSEYKAQRPSMPDDLRSQIEPIHNIIKAMGLPLLIESGVEADDVI
GTLARQATEQQLDVVISTGDKDMAQLVTDHVLLMDTMKNEFMDRNGVIEKFGVPPELIID
LLALVGDKVDNIPGMPGVGEKTALALLQGLGSIEQIADQLDKVADLGFRGSKSFAAKFVE
HKEILDLSYTLATIKTDVELHCGPAELLQTPPDTEALKALYQEYEFRNLLAELDPELAAV
PAKPATPAMDVNYQTILSEAELQDWVGRLVKAPYFAFDTETTSLNYRDARVVGMSFAIEA
GEAAYVPFGHDYLDAPEQLSEAVVLAALKPLLEAELPIKLGQNLKYDANVLKNHDIQMRG
IGLDTMLESYVLNSVQTRHDMDSMANFFLNHATTPFEAIAGKGAKQLTFNQIPLEEAAFY
AAEDADITLRLHHHLAEQLAAEPELQSVFTDIEMPLVPILAEMEYTGVKIDSKLLAIQSD
EIAKRLKELELKAHELAGEPFNLSSPKQLGEILFTKLELPILKKTPKGAPSTAEEVLQEL
ALDYPLPKLLMEYRGLSKLKSTYTDKLPLMVNQHSGRIHTSYHQANAATGRLSSSDPNLQ
NIPIRTPEGRRIRQAFIAEPGYKLVAADYSQIELRIMAHLSKDKGLLDAFAKGLDVHKAT
AAEVFGVALDSVTTEQRRRAKAINFGLIYGMSAFGLSRQLGIPRHESQSYMDIYFERYPG
VQRYMEDTRALAAEKGYVETLFGRRLYLPEINAKNGARRKGAERAAINAPMQGTAADIIK
KAMIKVAAWLKEQADGEVRMLMQVHDELVFEIREDKVEDFKLQICDLMQHAASIDVPLLV
EAGDGDNWDQAH
NT seq 2739 nt   +upstreamnt  +downstreamnt
atggctgccttacccagtaaacctctgatcctagttgatggatcttcttatctttatcgt
gcctattttgcctctttaaaggcgggtctacgtaccagtgatggccgccccagtggggca
gttcgcgtggtcactaatatgctgcgcagcctgcacaagcagttccccgactcgcaagtg
acagtggtgtttgatgccaaaggtaagacctttcgtgacgatctgtactcggaatataag
gcacagcggccctccatgcccgacgatctacgcagccaaatagaaccaattcacaacatt
attaaagccatgggcttgccgctattgattgagtctggcgtagaagctgatgacgtgatc
ggcactctggcgcgccaagccaccgagcagcaattagacgtggtgatcagcaccggcgat
aaagacatggcgcagttggtcaccgatcatgtgctgttaatggacaccatgaaaaatgag
tttatggaccgcaatggtgtgatcgagaagtttggcgtgccgccagagctgatcatagat
ctgctggcgctagtgggcgataaagtggataacattccgggcatgccgggcgtaggtgaa
aaaaccgcgctggccttgttgcagggcttgggctcgattgaacagattgcagatcagctc
gataaagtggcggatctgggctttcgtggatctaagagctttgctgctaagttcgtcgaa
cataaagagatcttggacttatcttataccttggccactattaaaaccgatgtagagctg
cattgtggccccgccgaattgctgcaaaccccgccggataccgaagcactgaaagcgctg
tatcaagaatacgaatttcgtaatttattagccgagctggatccagagcttgccgctgtt
cccgccaagcctgcgacaccggcaatggacgtgaattatcaaaccattttgagcgaagcc
gagttgcaagactgggtagggcgcttggtcaaggcaccgtattttgccttcgataccgaa
accaccagcctcaattatcgcgatgcacgcgtagtaggtatgtcgtttgccatagaggcg
ggtgaggcggcctatgtgccttttggccacgattatttagatgcgccggagcaattgagt
gaagccgtggtattggcggcgttaaagccgttattagaggccgaactgccgattaaattg
ggccagaatttaaagtacgatgccaatgtattgaaaaatcatgacattcagatgcgtggc
attgggctggatactatgttggagtcttatgtactgaattcggtacaaacccgccatgac
atggacagcatggctaattttttcttaaatcatgccactacgccctttgaagccattgcc
ggcaagggcgcaaagcagctgacctttaatcaaatacccttagaagaagcggcgttttat
gcggcagaagacgcagatattacgttgcgcttgcatcatcacttagccgagcaactggcc
gccgagcctgagttgcaaagcgtattcaccgatattgaaatgccattagtgccgattctg
gccgagatggaatacacgggcgtgaagatagacagcaagctgctggccattcaaagtgat
gaaattgctaagcgcctaaaagaattagagttaaaagcgcacgagttagccggcgaacct
tttaacttaagctcgccaaagcagctgggtgaaattttgtttaccaagctagaactaccg
attttgaaaaagacgcccaagggtgcgccttcaacggcagaagaagtgctgcaagagctg
gcgttggattatccgctgcctaagttattgatggaatatcgcggcttaagcaagcttaag
tctacttatacagacaagctgccactaatggtgaatcagcacagtggccgcattcatact
tcctatcatcaggccaatgctgccaccggtcgcttgtcgtcttcggatcctaacttacaa
aatattccgatccgcactcccgaagggcggcgcattcgccaagcctttattgccgagcct
ggttataaactggtggcggcggattactcgcaaattgaactgcgcattatggcgcactta
tccaaagataaaggcctgctcgatgcctttgctaagggcttagatgtgcacaaggccaca
gccgcggaagtgttcggcgtggcgctcgacagcgttactaccgagcagcgccgtcgtgcc
aaagccattaactttggtttgatctacggcatgagcgcctttggtttatcgcgccagtta
ggcattccgcgccacgagtcgcagtcttatatggatatttactttgagcgctatccaggc
gtgcagcgttacatggaagacacccgcgccttggccgcagaaaaaggctacgtagagacc
ttgtttggtcgccgtttatatttaccagagataaatgctaaaaacggcgcgcgccgtaaa
ggtgccgagcgtgccgctatcaacgcgcctatgcagggaacagccgccgatattatcaag
aaggcgatgatcaaagtggccgcttggttaaaagaacaagcagatggtgaagtacgcatg
ctaatgcaagtacacgatgagttggtgtttgaaattcgtgaagataaagttgaggatttt
aaactgcagatttgcgatttaatgcagcatgcggccagtattgatgtgccgttactggtg
gaagccggcgacggtgataactgggatcaagcgcattag

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