Oceanisphaera profunda: CBP31_09110
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Entry
CBP31_09110 CDS
T04856
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
opf
Oceanisphaera profunda
Brite
KEGG Orthology (KO) [BR:
opf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
opf03400
]
CBP31_09110
DNA repair and recombination proteins [BR:
opf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CBP31_09110
Archaeal homologous recombinant proteins
CBP31_09110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
cobW
AAA_21
nSTAND3
GTP_EFTU
AAA_22
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
ART82763
UniProt:
A0A1Y0D5D7
LinkDB
All DBs
Position
2086212..2089652
Genome browser
AA seq
1146 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKIDFREPPFRDSGLFAIIGPTGAGKTTLLDAICLALYHETPR
MKQVSASSNELMTRHTADCLAEVEFEIKGQGYRAFWSQRRSRDQLSGKLQAPKVELARLD
GTILTTKINDKLRLTETLSGLDFGRFTKSMLLAQGGFAAFLHANANERAELLEELTGTDI
YAQISRRVFEQTREQQAALNELKARAQGMELLDDAERLQVQADMAAAELELAQQYKILAQ
AQTSLQRIGAYQTAQQQQAQTEQTLQAANLAWQAQDAARQQLSQAVPANRLLPYWQQWQD
ASTRGQSFANQLSQEQAELGLLNKQSQQLCWQALQVSGQLTQQLTLAEQRLSEEQTKLSQ
QMAVNPVAERLGEYLAGWREQIQANAKEQDNLVRIQKAKVTLQTKRDTLEKQCQQTQLQV
TDAEQQVAQAKLAMDEQQQQLAQLLAGQSLPELRQKLHSLSQQQGQWSQVRELWTRITKQ
QKTHADLKDTLALQEPELAKLELQLTQSRAEYKSLQEQIRDKEKLLEQEQRIRALEAHRA
RLQPEEACPLCGSESHPAIAAYQALDDATALSLAEKQQERAEREQQGQQLSQAFAKRQAG
VEQGQRQVQAQVAELSELQLQLSTLLTTLQIIDTDPACQQTELEQRQQQLQALTSQCNQL
EQQQEAVYRYQEQVQQAEQALAGLQTQQGLRSQELQSLSEQIAQQQQQLTEQQVLVAQQQ
ATLAASLAELNWAVPNDWTAWLADCEQQWQAWKSHQVRGQQLIAERQQLAGQLQQAHTEQ
ALWQKRWSALAIPDLAAMGDIKNDNAELNSFTELTELTEQWQASQQQLQQKTARLDTLHQ
QATELETELQSRLAAWQQQLSESPFSDEAALLAACLSESEFERLAQAQRQLEQALHRAQT
LCEQATQAADAAKLALGELDPAAQAALHAQLQQSQAEFNATQQQIGGWRTRLDTDAERRQ
RQQALFANIDAQQQSLQLWDQLNHLIGSADGAKYRRFAQGLTLEHLVHLANQRLVRLHGR
YQLARTAGGELELSVIDTWQADVARDTQTLSGGESFLVSLALALALSDLVSSKTRIDSLF
LDEGFGTLDSETLEVALDALDALNASGKMIGVISHIEALKERVPVQIKLSKSQGLGLSRL
APEFEV
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcagcctacggctaaaaaatctcaactccttaaaaggcgagtggaaaatt
gactttagagagccgccatttcgtgacagtggcttgttcgccattatcgggcccacgggc
gccggtaaaaccactttgctcgatgccatttgtttagccctgtatcacgaaacgccgcgc
atgaaacaggtgtctgccagcagcaatgagctaatgacccgccacaccgcggattgtttg
gcggaagtggagtttgagattaaaggccaaggttatcgggctttttggagccagcgccgc
tcccgtgaccaactgagcggcaagctgcaagcgcccaaggtggagctggcgaggttagat
ggcactattcttaccactaaaattaacgacaagctgcgcttaacggaaacgttgagcggc
ttagatttcgggcgcttcactaagtcgatgttattggcccaagggggctttgccgccttc
ttgcatgccaatgccaacgagcgcgccgaattactggaggaactcaccggcaccgatatt
tatgcgcaaatttcgcgccgtgtatttgagcaaacccgcgagcagcaagctgcgttgaat
gagcttaaagcccgcgctcaaggcatggagttgctggatgatgctgaacgcttacaagtg
caagcggatatggccgccgccgagcttgaattagcgcagcaatataaaatcttagcgcaa
gctcaaactagtctgcaacgcattggcgcctaccaaacggcacagcagcaacaagctcaa
accgagcagacgctgcaggcggcaaacttggcttggcaagctcaagacgctgcgcgccag
caattaagccaagcggtgccggccaatcggttactgccttattggcaacaatggcaagat
gccagcactcgtgggcaaagctttgccaatcaattaagccaagagcaggcggaattaggg
ctgcttaataaacagagtcagcagctgtgctggcaggcactacaagtgagcggccaactg
actcaacagttgacgcttgccgagcaacgactgagtgaagaacaaactaaattaagccaa
caaatggcggttaatcccgtagctgaacggctgggtgaatacttggcgggctggcgtgaa
caaattcaggctaatgccaaagagcaggacaatcttgtacgcatacaaaaagccaaagtc
acgctgcaaactaagcgtgacacgcttgaaaagcagtgccagcaaactcagttacaagtg
acggatgcggagcaacaagtagcacaagccaagctggctatggatgaacaacagcaacaa
ttggcgcaattattagccggccaatcattgcctgagctgcggcaaaaattacacagccta
agccagcagcaagggcaatggagccaagtgcgcgagctttggactcgcattacgaagcag
caaaagactcatgctgatctcaaggacacactggccctccaagagccagaattggcgaaa
ctggagctgcaattaacccaatcgcgcgcagaatataaaagtctacaagagcagatccgc
gataaagaaaagctgttggagcaagaacaacgtattcgcgcactggaagcacacagagcc
agactacaacccgaagaagcctgccccttatgtggcagtgaaagtcatccggccattgcg
gcgtatcaggcgctcgatgatgccaccgcgcttagcttggccgaaaagcagcaagagcgc
gccgagcgcgagcaacaaggccagcaattaagccaagcctttgccaagcgccaagccgga
gtggagcaggggcagcggcaagtgcaggctcaggtcgctgaacttagcgagttgcagcta
cagctcagcaccttgttaacgacattacagattattgataccgatcctgcttgccagcaa
acggaactggagcaacgccaacaacagctgcaagcactaacaagccaatgtaatcagttg
gagcaacaacaagaggcggtatatcgctaccaagagcaggttcaacaagccgaacaagcg
ctagcaggattacaaacccagcaggggttacggagccaagagctgcaatctttaagcgag
caaatagcccaacagcaacagcagctcactgagcaacaagtgttagtagctcaacaacag
gcgacacttgcagcttcactggctgagcttaactgggcagtacccaatgattggaccgct
tggttggccgattgtgaacagcaatggcaagcctggaaaagccaccaagtgcgtggccag
cagcttattgctgaacgccagcagttggcagggcaattacagcaagcgcacaccgagcaa
gctctgtggcaaaaacgctggtcggcgctggccattccagacttagctgcgatgggcgat
attaaaaatgataatgccgagctgaactcattcacagagctgacagagttaaccgagcaa
tggcaagctagccaacagcaactgcagcaaaaaacggcgcgcctcgacaccttgcatcag
caagcgactgaacttgagactgaactgcaaagccgcttggctgcttggcaacagcagtta
tcagagagcccttttagcgatgaagcggccttgttggcagcatgcttgagtgagtcagag
tttgagcgtttagcccaagcgcaacgccagcttgaacaagctttgcaccgcgcacaaacg
ctgtgtgaacaagctacgcaagcggcagatgcagccaagctggcattaggcgagctggat
cccgcagcgcaagctgctttacacgcgcagctgcaacaaagccaagccgagtttaacgcc
acacaacagcaaattggcggctggcgcacgcggttagacacagacgccgagcgccgccag
cgccagcaagcgttatttgccaacatagacgcccaacagcagagcctgcaattatgggat
caattgaatcatttgattggatctgccgatggcgccaagtatcgccgctttgcccaaggg
ctaacgctggagcacttagtgcatttggccaaccagcgcttagtacgcttacacggtcgc
tatcaattggcacgcaccgccggcggcgaactggaattatcggtgatcgatacctggcaa
gcagacgtagcccgtgatacccaaaccttatcggggggtgaaagcttcttggtgagcttg
gcattggccttggcgctctcagacttagtcagcagcaagacccgcattgactctttgttt
ttggatgaaggctttggcaccctagactcagaaaccctagaggtggcattggatgcgctg
gatgcgctcaatgccagcggcaagatgataggggtgatcagccatatagaagcgctaaaa
gaacgagtgccggtacaaataaaattgagcaagagccaaggcttaggcttaagccgactg
gcaccagagtttgaggtttag
DBGET
integrated database retrieval system