Oceanisphaera profunda: CBP31_09620 Help Entry CBP31_09620       CDS       T04856                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism opf  Oceanisphaera profunda Pathway opf02020   Two-component system opf02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:opf00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     CBP31_09620  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     CBP31_09620  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:opf03021]     CBP31_09620 Transcription machinery [BR:opf03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      CBP31_09620 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID Motif Other DBs NCBI-ProteinID:  ART82852 UniProt:  A0A1Y0D5L8 LinkDB All DBs Position complement(2206352..2207785) Genome browser AA seq 477 aa AA seqDB search MGQQLTMTPQLQQAIRLLQLSTLELQQEIQLALENNPLLEQEEAEALEYDDAELEQQPSS PDEQLATDKAMEQHTLSDEMPMDTQWDDIYTASAGTSGTGGLPAGLEDTVYQGETTETLQ DYLLWQMQLTPFSETDQAIALAIIDAIDEAGYLSLDIDGILASVSGGEQQIEADEIEAVL KRIQHFDPLGVAARSVQECLRIQLEALPVTTPWLTEAQLLIEQHMDLLGNRDYRTLQRLT KLKEDELRDVLALIQQLEPRPGNNLLQHESEYVIPDVVVTKQQGVWTAELNMEALPKVRL NQTYAAMGQSKQGSDGQFIRQHTQDAKWFIKSLESRNETLLKVANCIVDQQQAFFEYGAE AMKPMVLNQVAEVVEMHESTISRVTTQKFLHSPKGVFELKYFFSSHVATESGGECSSTAI RAFIKKLVGAENPVKPLSDSKIAQLLAEQGIQVARRTIAKYRESLAIPPSNQRKRLL NT seq 1434 nt NT seq  +upstreamnt  +downstreamnt atgggtcagcagctgaccatgacgccgcagctgcaacaggccattcgccttttgcagctg tcaacgctagagctgcagcaagaaattcaattggcgctagaaaataatccgctactcgag caagaagaagccgaagcgctcgagtatgacgacgctgaactcgagcagcagcccagcagc ccagatgagcagctggccaccgacaaagccatggaacagcacactttgtctgacgagatg cccatggacacccagtgggatgatatttataccgcctcggcgggcaccagcggcaccggc ggcctgcccgctgggttagaagacaccgtctatcaaggcgaaaccaccgaaaccctgcaa gattatctgttgtggcagatgcagctcacgccctttagcgaaaccgaccaagccatagcg ctcgccattatcgatgccatcgatgaagccggttatttaagcctggatatagacggcatt ttggcgagtgtcagcggtggcgagcagcagatagaagccgacgaaatagaggcggtactg aagcgtattcagcattttgatcctctaggcgtggcggcgcgcagcgtacaagaatgtttg cgtattcagctggaagccctgcccgtcaccacgccttggttaaccgaggcacagctgctg attgaacagcacatggacttactgggcaatcgcgactatcgcactttgcagcgcctgacc aagctgaaagaagatgagcttagagatgtattggccttaattcagcaacttgaacctagg cctggtaataacctgctgcaacatgaatctgaatatgtgatccctgatgtggtggtcacc aaacagcaaggggtgtggaccgccgagctcaatatggaggcgctgcccaaggtgcggtta aatcaaacctatgcagccatgggccagagcaaacaaggtagcgacggccagtttattcgc caacatacccaagatgcgaagtggtttatcaaaagcttagaaagcagaaatgagaccttg ctcaaggttgctaattgtattgtcgaccaacaacaggcattctttgagtatggagccgag gccatgaaacccatggtactcaatcaagtagcggaagtggttgagatgcacgagtcgact atttcccgcgtcaccactcaaaaatttctgcattcgcccaagggtgtgtttgagttaaaa tattttttctctagccatgtggctaccgaaagtggcggagaatgctcttctacggcgatt cgtgccttcattaagaaattagtcggggcagaaaacccggttaagccgttgagcgacagt aaaatcgcacaattattagccgaacaggggatacaggtggcaagacggaccatagccaag tatcgtgagtcgttggccatccccccttccaatcagcgcaaacgcctgttgtaa

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