Oceanisphaera profunda: CBP31_10180
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Entry
CBP31_10180 CDS
T04856
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
opf
Oceanisphaera profunda
Pathway
opf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
opf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CBP31_10180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opf03019
]
CBP31_10180
03009 Ribosome biogenesis [BR:
opf03009
]
CBP31_10180
03036 Chromosome and associated proteins [BR:
opf03036
]
CBP31_10180
Enzymes [BR:
opf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
CBP31_10180
Messenger RNA biogenesis [BR:
opf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CBP31_10180
Ribosome biogenesis [BR:
opf03009
]
Eukaryotic type
90S particles
RNase
CBP31_10180
Prokaryotic type
rRNA processing factors
CBP31_10180
Chromosome and associated proteins [BR:
opf03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
CBP31_10180
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
ART82945
UniProt:
A0A1Y0D7B0
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All DBs
Position
2316480..2317148
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AA seq
222 aa
AA seq
DB search
MKNLHILEKKIGYTFNDQAMLVRALTHRSAGSRHNERLEFLGDSLLSMVIADALFHRFPR
VNEGDMSRMRATLVREKTLAELAREFELGEYLILGPGELKSGGFRRESILADAVEAIIGA
VYLDANIEQMQTMMLGWYEDRLNAIQPGIDQKDPKTRLQELLQGKRKPLPTYTVEQVIGE
AHNQKFTVHCQIEGMAQPVIGIGTSRRKAEQSAAEHALEVLL
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatttgcacattttagaaaagaaaataggttacacctttaatgaccaagccatg
ttggtacgggcgttaacgcaccgtagcgctggttcgcgccataatgaacgcttagagttt
ttgggtgattcactgctgagcatggtgattgccgatgcattgttccatcgttttcctcgg
gttaacgaaggcgatatgtcgcggatgcgcgctacgctggtgcgagagaaaaccttggcc
gagctggcgcgcgagtttgagctgggcgagtatttaatcttaggcccaggcgagctgaag
agcggtggttttcgccgtgagtcgattttggccgatgcggtagaagctattataggtgcc
gtgtatctggatgccaatatcgagcagatgcaaaccatgatgctgggctggtatgaagac
cgccttaatgcgattcaaccgggtatcgatcaaaaagatcctaaaacccgcctgcaagaa
ctgttgcagggtaagcgcaaacccttgcctacctatacggtggagcaagtgattggtgaa
gctcacaaccaaaaatttaccgtgcattgccagattgaaggcatggcacaacctgtgatt
ggcattggtaccagtcgtcgcaaggccgaacaatcagcggccgaacatgctttggaagtc
ttgctatga
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