Oceanisphaera profunda: CBP31_10700
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Entry
CBP31_10700 CDS
T04856
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
opf
Oceanisphaera profunda
Brite
KEGG Orthology (KO) [BR:
opf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
opf03400
]
CBP31_10700
DNA repair and recombination proteins [BR:
opf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CBP31_10700
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
ChlI
DnaB_C
Zn_ribbon_LapB
Lon_C
AAA_22
AAA
RecA
AAA_16
SLFN-g3_helicase
ABC_tran
AAA_14
AAA_24
GvpD_P-loop
NTPase_1
nSTAND3
Rad51
Zeta_toxin
FtsK_SpoIIIE
AAA_29
NACHT
cobW
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
ART83032
UniProt:
A0A1Y0D651
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Position
2439284..2440654
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AA seq
456 aa
AA seq
DB search
MAKSKTAFVCGECGGEYPRWQGQCTECKEWNTITEIRLAPATAAASRNSRFVGYAGTQDN
KVQTLDQVALTELPRIPSGFSELDRVLGGGMVPGSAILIGGSPGAGKSTLLLQVMCGLAS
RMKTLYVTGEESLQQVAMRAQRLGLPRDQLRMLSETSVEQICHIAREEKPAVIVIDSIQV
MQVEGITSSPGSVSQVREAAAMLTRYAKQHGVVVLMVGHVTKDGALAGPKVLEHCIDCSL
MLDGENDSRFRMLRSHKNRFGAVNELGVFAMTETGLKEVSNPSAIFLSRGEEQTTGSVVM
IIWEGTRPLLVELQALVDYSQLGNPRRVTVGLEQNRLSMLLAVLHRHGGLQMADQDVFVN
VVGGVRVEDTSADLALLLALVSSFRDKALPKELVVFGEVGLSGEIRPVPSGQERLMEAAK
HGFTRAIIPWANRPKHSPPGMEVIAVKKLEEALEAL
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggccaagtctaaaacggcgtttgtttgcggtgaatgtgggggagaatatccgcgctgg
cagggccagtgtacggagtgtaaagagtggaataccatcaccgaaattcgcttagcacct
gccacggcggcggccagccgtaatagccgttttgtcggttatgcgggcacccaagacaat
aaagtacaaacactagaccaagtggcactcaccgaattgccgcgcattcctagcggcttt
agtgagctagaccgcgtattaggcggcggcatggtgccaggttccgccattctgattggc
ggcagcccaggtgcgggtaagagtacgctgttattacaagtgatgtgtggcttggccagc
cgcatgaaaaccctctatgtgaccggtgaagaatcactgcaacaagtggcaatgcgcgcc
cagcgtttagggctgccgcgagatcagctgcgcatgctgtcggaaaccagcgtcgagcaa
atttgtcatatcgcccgggaagaaaagccggcggtgatcgttatcgactccattcaggtg
atgcaggtagagggtattacctcgtcgccaggctcggtcagccaagtgcgcgaggcggcg
gccatgcttacccgttatgccaaacagcacggcgtggtggtgttgatggtggggcacgtc
accaaagacggtgccttggcgggacccaaggtgttggagcattgcatcgactgttcgctg
atgctcgatggcgagaatgacagccgctttcgcatgctgcgcagccataaaaaccgtttc
ggtgccgtgaatgagttgggcgtgtttgccatgactgaaactggcttaaaagaggtcagc
aacccgtcagccattttcttaagtcgcggcgaagagcaaaccaccggctcagtggtgatg
attatttgggaaggcacgcgccccttgctggtggagctgcaagcgctggtggattattca
cagttaggtaatccgcgtcgcgtcaccgtgggtttggagcaaaatcgactgtcgatgctg
ttggcggtgttgcatcgccacggtggtttgcaaatggcggatcaagatgtgttcgttaac
gtggtgggcggggtgcgggtagaagacaccagtgccgacttagccttattactggcctta
gtgtcgagctttcgcgataaggcgctgcctaaagagctagtggtttttggcgaagtgggc
ttgtccggcgaaattcgccccgtgccatcgggtcaagaacgactcatggaagccgctaag
cacggctttacccgcgcgattattccttgggcgaaccgacccaagcattcgccacccggc
atggaagtaatagcggttaagaaattagaagaagccttagaggcgttgtaa
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