Oceanisphaera profunda: CBP31_10895
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Entry
CBP31_10895 CDS
T04856
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
opf
Oceanisphaera profunda
Pathway
opf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
opf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CBP31_10895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opf03019
]
CBP31_10895
03110 Chaperones and folding catalysts [BR:
opf03110
]
CBP31_10895
03029 Mitochondrial biogenesis [BR:
opf03029
]
CBP31_10895
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
opf04147
]
CBP31_10895
Enzymes [BR:
opf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CBP31_10895
Messenger RNA biogenesis [BR:
opf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CBP31_10895
Chaperones and folding catalysts [BR:
opf03110
]
Heat shock proteins
HSP60 / Chaperonin
CBP31_10895
Mitochondrial biogenesis [BR:
opf03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CBP31_10895
Exosome [BR:
opf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CBP31_10895
Exosomal proteins of other body fluids (saliva and urine)
CBP31_10895
Exosomal proteins of breast cancer cells
CBP31_10895
Exosomal proteins of colorectal cancer cells
CBP31_10895
Exosomal proteins of bladder cancer cells
CBP31_10895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
jr-ZPR1
Motif
Other DBs
NCBI-ProteinID:
ART83066
UniProt:
A0A1Y0D7C9
LinkDB
All DBs
Position
2473695..2475332
Genome browser
AA seq
545 aa
AA seq
DB search
MAAKDVKFGNDARVKMLAGVNILADAVKVTLGPKGRNVVLDKSFGAPVITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDEAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGI
DKAVRHAVEELKALSVPCKDTKAIAQVGTISANADETVGALIAEAMEKVGTDGVITVEEG
QGLQDELDVVEGMQFDRGYLSPYFINKQETGTVELDDVFVLLVDKKVSNIRELLPVLEGV
AKQSKPLLLIAEDVEGEALATLVVNNMRGIVKVVGVKAPGFGDRRKAMLQDIAILTGGTV
ISEEVGLDLEKATLEDLGRAKRIVISKDNTTIIDGAGEATTIEGRVAQIRQQIEESSSDY
DKEKLQERVAKLAGGVAVIKVGAATEMEMKEKKTRVDDALHATRAAVEEGVVPGGGVALV
RAASKLAELTGDNEDQNVGIKVALRAMESPLRQIVTNAGEEASVVVSKVKDGSGNFGYNA
GNGTYGDMLDMGILDPTKVTRSALQFAASVAGLMITTEAMITDLPQKDGPGMPDMGGMGG
MGGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacgtaaaatttggtaatgacgcccgcgtaaaaatgctggcaggcgta
aacatcctcgccgacgccgttaaggtaaccctgggccctaaaggtcgcaacgtagtactg
gataagtcattcggtgcacctgtgatcactaaagacggtgtatccgttgccaaagaaatc
gagctggaagacaagttcgaaaacatgggcgcccagatggttaaagaagtggcgtctaag
gcgaatgacgaagccggtgacggtactactactgcaaccgtattagctcagtctatcgtg
aacgaaggcctaaaagccgttgccgctggtatgaatccaatggatctgaagcgcggtatc
gacaaagccgttcgccacgctgtagaagagctgaaagcattatctgtaccttgtaaagac
accaaagccattgctcaggtaggcactatctctgccaacgccgatgaaactgtgggtgct
ttgatcgctgaagccatggaaaaagtgggcacagatggcgtgatcaccgttgaagaaggc
caaggcttgcaagacgagctggatgtggttgaaggcatgcagtttgaccgcggttacttg
tctccctatttcatcaacaagcaagaaacaggtaccgttgaattagacgacgtgtttgtg
ctgctggttgataagaaagtgtctaatatccgcgaattgttgccggtattggaaggcgta
gctaagcaatctaagccgttattgctgattgctgaagatgttgaaggcgaagcgctggcc
accttggtggtgaacaacatgcgcggcatcgtgaaagttgtgggcgttaaagcgccaggc
tttggcgaccgtcgtaaagctatgctgcaagatatcgccattctgaccggcggtactgtg
atctctgaagaagtgggtctggatctggaaaaagcgacgctggaagacttaggtcgtgcc
aagcgcatcgtgatcagcaaagacaacaccaccattatcgatggcgccggtgaagcgacc
accattgaaggtcgtgtagcgcaaattcgccagcaaattgaagaatcttcttcagactac
gacaaagaaaaactgcaagagcgcgtggccaaattggcaggcggtgtagccgttatcaaa
gtcggtgctgcgaccgaaatggaaatgaaagaaaagaaaactcgcgtcgatgatgcactg
catgccactcgcgctgcagtagaagaaggcgtagtaccgggcggcggtgtggcactggta
cgtgctgcgagcaagcttgcagagctgaccggtgacaacgaagaccagaacgtgggtatc
aaggttgctcttcgcgccatggaatctccactacgtcaaattgttaccaacgccggcgaa
gaagcgtcagtggtggtttctaaagtgaaagacggttcaggtaacttcggttataacgcc
ggtaacggtacgtacggcgatatgctggatatgggcatcttggatccgactaaagtaacg
cgctctgcactgcagtttgcggcttcagtagcgggcttgatgatcaccaccgaagccatg
atcaccgatctgccacagaaagatggcccaggcatgcctgatatgggcggcatgggtgga
atgggcggcatgatgtaa
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