Oceanisphaera profunda: CBP31_10940
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Entry
CBP31_10940 CDS
T04856
Name
(GenBank) miniconductance mechanosensitive channel MscM
KO
K22051
miniconductance mechanosensitive channel
Organism
opf
Oceanisphaera profunda
Brite
KEGG Orthology (KO) [BR:
opf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
opf02000
]
CBP31_10940
Transporters [BR:
opf02000
]
Other transporters
Pores ion channels [TC:
1
]
CBP31_10940
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
ART83074
UniProt:
A0A1Y0D6Z5
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All DBs
Position
complement(2483480..2486845)
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AA seq
1121 aa
AA seq
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MFAPILVLLTLLFSAPILADQNVADIEALLAEIPEGEQPELKKLREDYNQALQLVREGDR
YKEQAKGYQSFMEGYPAALKVLEKEQADLKPADLTFISELDEEAAQQELVETQAKRLGIR
RQREELTNALNLQELSNTGLHDLLDELRQQMRDTQQSLDKLQFADTRGRKETAIRTLVLA
REQHLQHRIQALELEELSSSNKDTISRIKLDILQRQLQNSDAKIEALQQRQNELRRAITQ
EAIEESDRLLNEVASDAQLLVEQQTVNQRLSALLNEKSRDVEALQLEYQTVERAASELTD
MKANLKDQLEWLQVSRGFGENLRNRLSELPAPYSLAQLESRIVQSRVDKYGYQETLDNLR
NNNYRTELLLSDKAQNITETQRLQVDELLATQQRLLERLVSATDNQIHEQTRLKVAYSRQ
NNQLQEIRALTDERLFWLPDLRPIGSQFPSAIIETFGWLLTLSTWTAVPQTLMQQSGASL
TLYGLSSLLVIYLGVMSRRSLRAYLARISPHIGNVTQDRYDYTFNTLLLSLLTAMPIPAL
LSLLGNAINSPWAPPVVVALANGLTQLMLPVFILLCARNLMLSNGLLIVHFNLPHDRVRR
IWGRFQNLMLSLLPALLVLYLARDYQEFSIYDTLGRLSFVIICLLTSLFSWRMYREDLPL
LVSPPRQDHLNVVNHLLWAVLIISPLLALIAALMGYLFTAHTLLRQLEVSVLVGMGFLMF
YYLVRRWMLIQRRRLAFDRAKTKRAEILAQRKEKDEITDGTLSSPSPEAEAAAVDEVDLD
TISAQSLGLLRSALMLGFLLSLMLLWSEINTAFSFLDSIEVWQVSSSLAGEDSLTPISLK
DLVLTLFVIVLTWITARNLPGLMELSVLQHIDLSPGTGFAITTISKYIVLIIGAFTTFGM
LGIDWSKTQWLVAALSVGLGFGLQEIFANFVSGLIILFEKPIRIGDTVTIRELTGTISKI
KTRATTIVDWDRREIIVPNKAFITEQFVNWSLSDAITRVRLMVRVRLDADIDLVQRITYE
AIEECSRILDSPAPEVFLVELTDSALVYEVRVYVEDMSYRMPMTHELHNLLLTRLRKHDI
KIPHQQVDIRLLGEQQMNAMLKAADLKPSGLTPKSPSKASD
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgcgcccatcctagtattgctaaccttattattttccgctcccatattggccgat
caaaacgtcgccgatattgaggcgctcttggctgagatccctgaaggggagcagccagag
ctaaagaaactgcgggaagactacaatcaggcgctgcaactggtgcgcgaaggcgatcgc
tacaaagaacaagccaaaggttatcagtcctttatggagggctacccggcggcactgaaa
gtgcttgaaaaagagcaagccgatctaaagcctgccgatctcacctttatctcagagctg
gatgaagaagccgctcagcaagaattagtcgaaacccaagccaagcgcttaggcattaga
cgccagcgtgaggagctaaccaacgcattaaacttgcaagaattaagtaacaccggcctg
catgacttgcttgatgaattgcgccagcaaatgcgggacacccaacagtcactggataaa
ctgcaatttgccgacacccgtggccgcaaagaaaccgccattcgcaccctagtattggcc
cgtgaacaacacctgcaacaccgcattcaagctcttgaattagaagaactatcttccagt
aataaagacaccatcagccgcataaaattagatattttgcagcgccagttacaaaattcc
gacgctaaaatagaggcgctacaacaacggcaaaatgaattacgccgcgccatcacccaa
gaagcaattgaggaaagcgatcgtttgctcaatgaagtcgcaagtgacgcccagttactc
gtagaacaacaaaccgtcaaccaacgcttatcggcgttattaaatgaaaaaagtcgcgac
gttgaagcgctgcaattagaataccaaaccgtggagcgcgccgcctccgagctgaccgac
atgaaagccaatctcaaagatcagctagaatggctgcaggtgagtcgaggctttggcgaa
aacttgcgtaaccggctcagcgagttgcccgcaccctactcattagcacagttagaatcg
cgcatcgtgcaaagtcgcgtcgataaatacggctatcaagagaccctcgataacctcaga
aacaataactatcgcaccgagctgctactcagcgacaaagcgcaaaacattaccgagacc
caacgcttacaagtggatgagctgttagccacccagcaacgtttattggagcggttagtc
agcgccaccgacaatcaaattcatgaacaaacccgtcttaaagtggcctatagccgacaa
aataaccagcttcaagaaattcgcgccctcaccgatgagcgcttgttttggctgccagat
ttgcgccccattggtagccagttccccagcgccattatagaaaccttcggctggttgctg
acactgtccacttggactgccgtcccccagaccttaatgcaacaaagtggcgccagctta
accctatatggcttaagctccctgctagttatctatttgggtgtgatgagtcggcgcagc
ttacgcgcctatttagcacgcattagcccacacattggcaacgtaacccaagacagatac
gactacaccttcaatactctgctgctaagcttgctcacggccatgccgataccggcgctg
ttatctttgctcggtaatgccattaattccccttgggcgcccccagtggtggtggcactg
gccaatggcttaacacaattaatgttgccggtgtttatcttgctgtgtgcccgtaatttg
atgctgagtaatggcttattgatcgtgcattttaacctgccccacgaccgagtgcgccgc
atttggggccgttttcaaaacctcatgttgtcactgctgcccgccttattagtcttatat
ctggcacgggattatcaggaattttcgatatacgacaccctaggtcgactcagctttgtc
attatctgcctgctaaccagcctgttttcatggcgcatgtaccgagaagatttgccgcta
ttagtctcgcccccgcgccaagaccatctcaatgtggtgaaccatctactgtgggccgta
ttaattatctcaccgttattggccttaatagcggcgctcatgggctatttatttaccgcc
cacaccctgctacgccaactggaagtctcagtattggtcggcatgggtttcttaatgttt
tattacttagtgcgtcgctggatgctgatccaacgccgccgactggcctttgatcgcgcc
aaaactaaacgcgcggaaatcttggcccaacgtaaagaaaaagatgaaatcacagacggg
actttaagtagtcctagcccagaggcagaagccgccgccgtagatgaagttgacttggat
accatcagcgcgcagtcgttaggcttgttacgctccgcactgatgctgggcttcttactc
agcctaatgctgctgtggtcggaaattaataccgcctttagctttctcgacagcatagaa
gtgtggcaggtctccagttcgctggccggtgaagactccctgacgcccatttcactcaaa
gacttagtgctcaccttgttcgtgatagtgctgacctggataacggcgcgcaacttaccc
ggcctgatggagctcagcgtcttacagcacatcgacttatcacccggcaccggctttgcc
attaccactatctctaaatacatagtgctgatcattggtgctttcaccacctttggcatg
ctcggcatcgactggtcaaaaacccagtggctagtggccgcgctctcggtaggcttaggt
tttggtttacaggaaatttttgccaatttcgtatcaggtttgattatcttatttgaaaag
ccaatccgtatcggcgacaccgtcaccattcgcgagctaaccggcactatttctaaaatc
aaaacccgcgccactaccatagtcgactgggacagacgcgaaattatcgtacccaacaaa
gcctttattaccgagcaatttgtgaactggtcactctcggacgccatcactcgggtgcgc
ttaatggtacgggtacgactggatgcggacatagatctagtgcagcgcattacctatgaa
gccatcgaagagtgcagccgcattcttgactcaccagcgccagaggtgtttttggtggag
ctaaccgactcggcgctggtttacgaagtacgagtgtatgtggaagacatgagttatcgc
atgccgatgacccatgaactgcataatttattgctgacacgcttgcgtaaacacgacatt
aaaataccgcaccagcaagtagatattcgcctcttaggtgagcaacagatgaacgctatg
ctaaaagcggcggacttaaagccaagcggcttaacaccgaaatcgcccagcaaagccagc
gactaa
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