Oceanisphaera profunda: CBP31_11445
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Entry
CBP31_11445 CDS
T04856
Name
(GenBank) hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
opf
Oceanisphaera profunda
Brite
KEGG Orthology (KO) [BR:
opf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
opf01002
]
CBP31_11445
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
opf01011
]
CBP31_11445
Peptidases and inhibitors [BR:
opf01002
]
Cysteine peptidases
Family C82
CBP31_11445
Peptidoglycan biosynthesis and degradation proteins [BR:
opf01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
CBP31_11445
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
GDE_N_bis
Motif
Other DBs
NCBI-ProteinID:
ART84037
UniProt:
A0A1Y0D9T2
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Position
2596722..2597981
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AA seq
419 aa
AA seq
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MPESTDIDLPAVSSLNLISQHELDKALDNSDVLDKSNVLDNNGVPEGVSLAATEVADSEL
TNPGLITPELSELDLTEADLIAAGVVEGDLGAAEQDIALPSPVSARPTMDVLSGLNNSPV
AASVFLDLEHYDADLVAGVKRFQARHGLTVDGVVGPQTYAWLDTSPLKRAQLLMRSMMRT
LISDELPPSYLLVNIPEYHLRLYQNQALVFESNVIVGQNQRKTPIMANKITSVVFNPPWN
VPRSILTKDILPKLHRDPDYLDRQGFEVLDSSGTQVISRHEWQTRLEEGGGFPYRLRQRP
GRGNALGAFKFHLPNSDAIYLHDTPGRGLFARDSRALSSGCVRVEGAEQLADWLVAGQMN
GSRLAALKAKPETRWIKVNEPLPLFMVYWPGWLGADGKPHFRNDIYGFDTRLTNPFSAG
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaatcaacggatattgatttgcctgcggtgtcgagccttaacctgatttcacag
catgagctagacaaggcgctggataatagcgacgtgctggataaaagtaatgtgctggac
aataacggtgtgcctgagggagtgagcttagcggcaaccgaggtcgctgactctgagtta
acgaatcccggactcatcactcctgaattaagcgagcttgacctcaccgaagccgattta
attgcggccggcgtggttgaaggcgatttaggggcggctgaacaggatatcgctctgcca
agcccagtgagcgctcgcccgacaatggatgtgttatctggcttaaacaatagccctgtg
gccgcgtctgtgtttctcgatttggagcactacgatgcagacttggttgctggcgtaaaa
cgctttcaagcgcgtcacggcttaaccgtggatggcgtggttggcccgcaaacctatgct
tggctagacacctcgccattaaagcgcgcgcaactgttgatgcgcagcatgatgcgcacc
ttgatcagcgatgaattaccgccttcttatctgttggtcaatatccccgaatatcatttg
cgcctataccagaatcaagccttggtatttgagagcaacgtgatagtgggacaaaatcag
cgtaaaacgccgatcatggccaacaaaatcaccagcgtggtgtttaatccaccttggaat
gtgccgcgctccattctgacgaaagatatcttgcctaagctgcatcgagatccggactat
ctggatcgccaaggatttgaagtgctggacagctctggcacccaagtgatttctcggcat
gaatggcaaactcggctggaagagggcggtggctttccttatcggttacgccagcgccca
ggtcgcggtaatgcgctaggggcctttaaatttcatctgcccaacagtgatgccatttat
ttgcatgacacccctggtcgcggcttgtttgcccgtgacagccgcgcgctgagctcgggt
tgtgtgcgcgttgaaggtgccgagcaactggccgactggttagtggcagggcagatgaac
ggcagtcgcttagccgcgctaaaagccaaaccagaaactcgctggatcaaagtcaacgag
ccgctacccttatttatggtgtattggcccggctggctgggcgcggatggcaaaccgcac
tttcgtaatgacatttacggttttgataccagactaaccaacccctttagcgccggctaa
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