Oceanisphaera profunda: CBP31_11875
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Entry
CBP31_11875 CDS
T04856
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
opf
Oceanisphaera profunda
Pathway
opf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
opf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CBP31_11875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
opf03400
]
CBP31_11875
Enzymes [BR:
opf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
CBP31_11875
DNA repair and recombination proteins [BR:
opf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CBP31_11875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
TACC_C
Vps53_N
Motif
Other DBs
NCBI-ProteinID:
ART83228
UniProt:
A0A1Y0D6Q4
LinkDB
All DBs
Position
complement(2692871..2693116)
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AA seq
81 aa
AA seq
DB search
MATKKPENMDFESALAELESLVNQLEEGDLSLEQSLKSFERGVQLVRAGQQRLSQAEQQV
QILLQQDTEQLTPFANLPEAQ
NT seq
246 nt
NT seq
+upstream
nt +downstream
nt
gtggctactaaaaaacctgaaaacatggattttgaaagcgccctcgcagaactggaaagt
ctggtcaatcagctagaagaaggtgatctgagtttggaacaatcgctaaaatcgtttgag
cgaggcgtacagcttgtgcgcgcaggtcaacagcgtttgagccaagccgagcagcaagta
caaatcttattgcagcaagataccgagcagctcaccccttttgctaacctcccagaggcg
cagtaa
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