Oceanisphaera profunda: CBP31_12695
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Entry
CBP31_12695 CDS
T04856
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
opf
Oceanisphaera profunda
Pathway
opf02020
Two-component system
opf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
opf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CBP31_12695
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CBP31_12695
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
opf02022
]
CBP31_12695
02035 Bacterial motility proteins [BR:
opf02035
]
CBP31_12695
Two-component system [BR:
opf02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
CBP31_12695
Bacterial motility proteins [BR:
opf02035
]
Flagellar system
Flagellar assembly proteins
Others
CBP31_12695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_30
AAA_2
AAA
HTH_20
Mg_chelatase
HTH_23
HTH_24
Sigma70_r4_2
HTH_11
MerR
HTH_Tnp_ISL3
AAA_3
FleQ
HTH_28
AAA_7
HTH_50
AAA_19
GerE
HTH_7
AAA_35
bpMoxR
HTH_3
AAA_22
HTH_29
Phage_CP76
HTH_DeoR
HTH_10
MCM
HTH_5
HTH_Crp_2
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ART83373
UniProt:
A0A1Y0D752
LinkDB
All DBs
Position
2872430..2873863
Genome browser
AA seq
477 aa
AA seq
DB search
MTHEVQPDVVDILLVEDDAGLQQALQDTLLLAGFSCAPVDNAEDAIIWLQHHAAKLVITD
VQMAGMDGLGLLDWINRRIPGLPVLVMTAYAQVSGAVAAIRAGAVDYLAKPFTPDTLLSV
VSRHITQPVLDDGNPVVGDASSIQLLQLATRVAESGASVMISGPSGTGKEVLARFIHQKS
DRANAAFVAINCAAIPDNMLEATLFGYEKGAFTGAVQGNPGKFEQANGGTILLDEITEMD
LNLQAKLLRVLQEREVERLGGRKTIALDVRVLATSNRDLRQAVADGRFREDLFYRLNVFP
LHWPALAERPDDIVPLAEFLLQRYAKELGRGQLQLGESAKARLLTWQWPGNVRELGNVIQ
RALILAQSTVIEAQDILLDELLAPAAVPLSVNPSMPVAELAIAEAASCYAANESAGEVNK
ATATDLSQELASQEQQIIWQTLQEHGGSRQQVAEQLGISPRTLRYKLARMREAGMEV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgactcatgaagtgcagccagatgtggttgatatcttattagtagaagacgatgcgggc
ttgcagcaggcgctgcaggatacgctattgctggcgggcttttcgtgcgcgcccgtagac
aatgcggaagatgccatcatttggttgcaacatcatgcagcgaaactagtgatcacagac
gtgcaaatggcgggtatggatggccttgggctattagattggattaatcgccgtattccg
ggtttaccggtgttggtgatgacggcctatgcccaagtgtcgggtgcggtggcggccatt
cgtgctggtgccgtggattatttagccaagccgtttacgccggatactttgttaagcgtg
gtgtcgcgccatataactcagccggtactggatgatggtaatccggtagtgggggacgcc
agcagtattcaattgttgcagttggccacccgcgtagcggagtcaggggccagtgtgatg
atcagcgggcctagcggtactggtaaagaagtgctggcgcgttttattcatcaaaagtcc
gatcgggctaatgctgcgtttgttgcgataaattgtgcggcgattcccgataatatgtta
gaagccactttatttgggtatgaaaaaggtgcctttaccggtgccgtgcaaggtaatccc
ggtaagtttgaacaggccaatggcggcaccatactgctggacgaaattaccgagatggac
ttaaacctgcaggctaagttattgcgggtgctgcaagagcgcgaagtggagcgcttaggt
gggcgcaaaaccattgcactggatgtgcgagtattagcgaccagtaaccgcgacttgcgt
caagcggtggcggatggccgttttcgagaagacttattttatcgcttaaatgtgttcccg
ctgcattggccagccttggccgagcggcccgacgatatagtgccgttagccgagttttta
ttgcagcgttacgccaaagagctaggtcgtggccagttgcaattaggtgagtctgccaaa
gctagattgttgacatggcagtggccgggcaacgtgcgcgagctgggtaacgttattcag
cgcgctttaattttggcgcaaagcacggtgattgaagcacaagatattttgttagatgag
ttgttagcgcctgcggctgtacctttgagtgtaaaccccagtatgccggttgcagagtta
gcgattgctgaggcggctagttgttatgcggccaatgagtctgcgggcgaagtgaataaa
gcgacggctacagatttgagccaagagttagccagccaagagcagcaaattatttggcag
acgctgcaagagcatggtggcagtcgccaacaggttgccgaacagttaggcattagccca
cgcactctgcgttataagctggcgcgcatgcgcgaagcgggaatggaggtttag
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