Oceanisphaera profunda: CBP31_13185
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Entry
CBP31_13185 CDS
T04856
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
opf
Oceanisphaera profunda
Pathway
opf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
opf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CBP31_13185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
opf03400
]
CBP31_13185
Enzymes [BR:
opf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CBP31_13185
DNA repair and recombination proteins [BR:
opf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CBP31_13185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
DUF1776
Motif
Other DBs
NCBI-ProteinID:
ART84061
UniProt:
A0A1Y0D8Z5
LinkDB
All DBs
Position
complement(2987970..2991494)
Genome browser
AA seq
1174 aa
AA seq
DB search
MVLQGNRLEDLREVAVHWLAQHPLRPLEDECILVQSNGMAQWLKMALATNPQGRGIAAAL
NVQLPGRFIWQAYRSVFAELPTSSPFDKTPLTWRIYRLLGDWPSLQASLGDQAEALGPLA
GFLTADQDPRRRYQLAANLSDLYDQYQLYRADWLSAWEAGQDIIITASGQRQPLALEQRW
QACLWRLLSEDIHQEVNSDTDAAWATASRALVHQQFIKECQAYTPENRPADLPRRVIVFS
IASLPRQTLELLQAIAKFTQVMIFATNPSQHYWGDLIEGKALLKREYRRIAERKTPANLN
LEDLHAYGHPLLASWGKQGRDFLHLLDEHDQPDSYRQHFNQQKIDLFSEPGDGCLLHQLQ
SDILNLCPLAERQARHSVIDPKLDNSLQFMAAHSPQREVEILHDQLLASFAEAKAKGEIL
NPRDILVMVPDINIYAPHIQAVFGRYLSSNDDSDAPRDQRYLPFHISDQSQRSQNTLLIA
LEKLLHLPQSRFTVSELSDLLDTPALRERFGIAEADLPTLRHWIHGANIRWGLNGAQRQQ
LQLPALEQNTWLFGLQRMLLGFAVGNHASWQGIEPYQEVAGLEAALVGPLALLLDALQQA
QQQLLVEHTPASWLSLIESLMADFFVETSAADNWAVTNLEMQLENLQAAWQEGGLCEELL
PIEVVREELLNGLDQPSLTQKFLGGSINFATLMPMRAIPFQQLWLLGMNDGDYPRNVRPA
DFDLMALDYRPGDRSRREDDRYLFLEALLSTRQRLVVSWIGRDIRDNTERPPSVIVSQLR
DHIKAGWQLMANTEHTEHVEHAEPPQDLLAALTTEHPLQPFSQRYFEQDRDPRLFTYARE
WRALHQRTAQAVQLEPQAHAVLTELAPWQPEAAITLVDLGRFLRTPSMYFYQHRLGIQWF
DNDQEMEDNELFSVNGLDSWSLRQQLIQRVTQQLTQQPQLVIADSLTDGLASLQRAGSLP
MAPFATLVQAALTDELTTPLSEYQQLLAAYPLHLAIEVQQLQLGELQLSDGVADIRHNGE
GDYVRLIMQASNLHIGNSIKYYNLVRQWPVHLFAQLRQPVATHLLGPATHLVLPAMAAEA
AQALLLDILSAYQAGMDQLLPLPCKTAFATLVASAKPQEVYEGGHSTEQYANQGELAETP
PLQQYWPDYERLTQDSRFMDFAKLVYHPLVEATQ
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atggtattgcaaggcaaccgcttagaagacctgcgggaagtggccgtgcactggcttgcc
cagcatccccttaggcccttagaagatgaatgcatcttggtgcaaagtaacggcatggcc
cagtggctcaaaatggccttggccactaatcctcaagggcgaggcatagcggcggcactt
aatgtgcagttgccggggcgctttatttggcaggcctatcgctcggtgtttgccgagctg
cctaccagctcaccgtttgataaaacaccgctaacgtggcgaatctatcggctgttggga
gattggcccagcctgcaagcaagccttggagatcaggccgaagcgctagggccgctggcc
ggatttttaactgcggatcaagacccacggcgacgctatcaattggcggccaatttatcg
gatctttacgaccaatatcagctgtaccgtgccgattggttaagcgcgtgggaagccggc
caagatattattattaccgccagcggccagcgccagcccttagccttagagcagcgctgg
caagcctgtttatggcgtctattaagtgaagatattcatcaagaggtgaacagcgacacc
gatgccgcctgggctacggccagtcgcgccttagtacatcaacagtttattaaagaatgc
caagcctacactccagaaaatcgccccgccgacttaccgcgccgggtgatcgtattcagt
attgcttctttaccccgccaaaccttggagctattacaggccatcgccaagtttacccaa
gtgatgatttttgccaccaaccccagccagcattactggggggatttaattgagggcaag
gcgctgttaaagcgcgaatatcggcgcattgccgagcgtaaaacgccggctaatttaaat
ctcgaagacttgcatgcttatggccatccgctgttggcctcttgggggaaacaaggtcga
gatttcttacacctgctcgatgagcacgaccaaccggatagctatcgccagcactttaat
cagcaaaaaatagacttatttagcgagccgggcgacggctgcctgttgcatcaattgcag
tcggatattcttaatttatgcccactggcggagcgtcaagctcggcacagtgtgattgac
cctaagctcgataacagcctgcaatttatggcggctcacagccctcagcgagaagtagag
attttacacgaccaactcttagccagctttgccgaggcgaaggccaagggtgagatatta
aatccgcgagatattctggtgatggtgccggatatcaatatttatgcgccgcatattcaa
gcggtgtttggccgttatctttccagcaatgacgacagcgacgcgccacgggatcagcgc
tatttaccttttcatatttcagaccaaagccagcgtagtcaaaatacgctgttgattgcc
ttagaaaaattgctgcacttgccgcaatcgcgttttaccgtgagcgagctgtctgatcta
ttagatacgccggccctgcgcgagcgctttggcattgctgaagccgacttgcccacgctg
cgtcattggatccacggtgccaatattcgttggggattaaacggtgcccagcgccagcaa
ttacagctgcctgctctagaacaaaacacctggctatttggtttacaacgcatgttactt
ggctttgcggtgggcaaccacgcaagctggcaaggcatagagccctaccaagaagtagcg
gggttagaagcggcactggttggccccttggcgttattattagatgccctgcaacaggcc
cagcagcaactgttagtcgagcacacgccggccagctggttaagcctgattgaaagccta
atggcggacttttttgtcgagaccagtgcggcggataactgggcggtcactaacttagaa
atgcagctagaaaacctgcaagccgcttggcaagaaggcggtctctgtgaggagttattg
ccgattgaggtagtgcgtgaagagctattaaatggcctggatcaacccagcctcacccag
aagtttttgggcggctcgattaactttgccaccttaatgccgatgcgcgccattcccttt
cagcagttgtggctgctgggcatgaacgatggggattatccgcgtaatgtgcgccctgcc
gacttcgacttaatggccctcgactatcgccccggcgatagatcgcgccgtgaagatgac
cgttacttatttttagaagcgctgctctccacccgtcaacgcttggtggtgagctggatt
ggccgagatattcgcgataataccgagcggccgccgtcggtgatcgtcagtcaattgcgc
gatcatattaaggccggttggcagctgatggctaataccgaacatactgagcatgttgag
cacgctgaaccacctcaagatctattagccgcgctcaccacagagcaccccttacagccc
tttagccaacgctattttgagcaagaccgagacccgcggctgtttacctatgcccgcgaa
tggcgggcattgcatcagcgcacggcgcaagcagtgcagcttgaaccccaagcccatgcg
gtattaaccgaactggcgccttggcagcccgaagcggccattaccttggttgatctggga
cgtttcttacgcaccccctccatgtacttttaccaacatcgcctgggcattcaatggttt
gataacgaccaagagatggaagataacgagctatttagtgttaacgggctcgatagttgg
agtttaaggcagcagcttattcaacgggtaacccagcagttaacccagcagccgcaatta
gtgattgccgacagcttaaccgacggtttggccagtttgcagcgagccggcagcctgccc
atggcaccctttgcgaccctagtacaagccgcgctgaccgacgagctaaccacgccgctt
agcgaatatcagcaattattagccgcctatcctctgcacttagccatagaggtgcaacag
ctgcagcttggtgagctgcagcttagcgatggcgtggcggatattcgtcataatggcgag
ggcgactatgtacgactgatcatgcaagccagcaacttacatatcggcaacagcattaaa
tattacaatttagtacgccagtggccggttcatctgtttgctcaattgcgccagcccgtc
gccacccatctcttaggccctgccacccacttagtgctgccagccatggccgccgaggcc
gcccaagcactgttactcgatatcttgtccgcctatcaagcaggcatggatcaattgctg
cccctgccctgcaagacggcgtttgccacgctggtggcttcggccaagccacaagaggtt
tatgaaggcggtcacagcaccgagcaatacgccaaccaaggggagctggccgagacaccg
cccttgcagcaatactggcccgattacgagcgtttaactcaggactcgcgttttatggat
tttgccaagttagtctatcaccccctagtggaggccacccaatga
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