Oceanisphaera profunda: CBP31_13960
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Entry
CBP31_13960 CDS
T04856
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
opf
Oceanisphaera profunda
Brite
KEGG Orthology (KO) [BR:
opf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
opf03032
]
CBP31_13960
03036 Chromosome and associated proteins [BR:
opf03036
]
CBP31_13960
03400 DNA repair and recombination proteins [BR:
opf03400
]
CBP31_13960
DNA replication proteins [BR:
opf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CBP31_13960
Chromosome and associated proteins [BR:
opf03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CBP31_13960
DNA repair and recombination proteins [BR:
opf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CBP31_13960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
ART84071
UniProt:
A0A1Y0D906
LinkDB
All DBs
Position
3160676..3160951
Genome browser
AA seq
91 aa
AA seq
DB search
MNKSQLIDKIAEGADITKAAAGRALDAFVESITETLKEGDTVSLVGFGTFSVRERAARTG
RNPQTGAAIEIAAAKTPGFKAGKTLKDAVNN
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaatctcaactgatcgataagattgccgaaggcgctgatatcactaaagctgcg
gctggccgtgctttggatgcatttgttgaatccattactgaaaccctcaaagaaggcgac
accgtctctttagtgggctttggtactttctctgtgcgcgagcgcgcagcacgtactggt
cgtaacccacaaaccggtgcagctatcgagattgcggccgctaaaacccctggttttaaa
gccggtaaaacattgaaagacgccgttaataactaa
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