Oceanisphaera profunda: CBP31_14550
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Entry
CBP31_14550 CDS
T04856
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
opf
Oceanisphaera profunda
Brite
KEGG Orthology (KO) [BR:
opf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
opf03016
]
CBP31_14550
Enzymes [BR:
opf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CBP31_14550
Transfer RNA biogenesis [BR:
opf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CBP31_14550
Prokaryotic type
CBP31_14550
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
AtzH-like
TMEM181_GOLD
Motif
Other DBs
NCBI-ProteinID:
ART83703
UniProt:
A0A1Y0D817
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All DBs
Position
3299405..3300199
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AA seq
264 aa
AA seq
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MRIALGIEYDGSQYFGWQRQRDVTSVQAEVEKALSKVANHPVLVQCAGRTDTGVHGLGQV
VHFDTHADRQASAWTLGMNANLPKDIAVRWAKPMPDDFHARFSATARRYRYIIYNHNMRP
AILHSGVSHYVGELDADKMHAAGQCLVGEHDFTSFRALQCQSHSPQRTILHLNVQRYGHY
VVLDVKANAFVHHMVRNIAGTLIKVGLGDADESWVAEVLAVRDRRLAGHTAKAGGLYMVA
VDYPDTFEVPQPAAGPLWLPESLR
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattgcccttggcatcgagtatgacggtagtcagtattttggctggcaacgacaa
cgagacgtgaccagtgtgcaagctgaggtagaaaaagccctatctaaagttgctaatcat
cccgtgttggtacagtgtgcaggccgcaccgataccggcgtgcatggcctgggccaagtg
gtgcattttgatactcatgcagaccgccaagccagtgcttggaccttgggtatgaatgcc
aatttgcccaaagatattgccgtgcgctgggccaagcccatgccggatgattttcatgcg
cgtttcagtgccaccgcgcgccgttatcgctacattatttataatcacaatatgcggccc
gccattttgcacagtggcgttagccattatgtgggtgagttagatgcggacaaaatgcac
gccgcgggtcagtgcttagtgggtgaacacgactttacctcgtttcgtgctctgcaatgc
caatcgcacagtccgcagcgcaccattttgcatttaaacgtgcagcgttatggccattac
gtggtgttagacgttaaagctaatgcctttgtgcaccatatggtacgtaatattgccggc
accttaattaaggtgggcttaggtgatgcagacgagtcgtgggtagccgaagtattagca
gtgcgcgaccgtagattagcggggcacacggctaaagccggcggtttatatatggttgcc
gtggattatcctgacacctttgaggtgcctcagcctgcagcaggccccttatggctgcca
gagtctttacgctaa
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