Oceanisphaera profunda: CBP31_14895
Help
Entry
CBP31_14895 CDS
T04856
Name
(GenBank) mechanosensitive ion channel protein MscS
KO
K03442
small conductance mechanosensitive channel
Organism
opf
Oceanisphaera profunda
Brite
KEGG Orthology (KO) [BR:
opf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
opf02000
]
CBP31_14895
Transporters [BR:
opf02000
]
Other transporters
Pores ion channels [TC:
1
]
CBP31_14895
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
TPR_24
DUF3974
Motif
Other DBs
NCBI-ProteinID:
ART83763
UniProt:
A0A1Y0D876
LinkDB
All DBs
Position
3368170..3369336
Genome browser
AA seq
388 aa
AA seq
DB search
MATSSFTLLWEQFEESLQDTSNALGMSGLNWQELMVAGIGQLLVSLMILLLFGVFYWLLA
NLLKLVLGRTRYGEKPFIAAKRVLRYLIGLAVIIAILAQYNAPDAVLKGAARAGLMALAF
YVLWLLLSRGLTSNLSRHHIDSSLEQLCKNTLSVALIAMGTITVLAQFGFDVLSIVAGLG
IVGIAVGFAAQSTLANFIAGITLLIERPFRIGDWVKIHGEEGKVIRIAFRTTWLRTRDNV
FTMIPNERVATSDIINFSVEGPTRIRIPLGIAYKESVAHAREVIMPLLSAHPMVITNEQM
QPRLQLRELADSSLNLSAQVWVHAKDIEVKGRISCELLETIKLALDDANIEMPFPHLQLF
IDEAKGLEPWLNSEFKRPAANLKPDAEH
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggcgacatcaagttttactttattgtgggaacagtttgaagaaagtttacaagacacc
agtaatgccttgggcatgagtggtttgaactggcaagagctgatggtcgctgggattggg
cagctattggtgtcgctaatgatactgctgctatttggtgttttttactggttgctggcc
aacttgcttaagctagtgttgggccgaacccgctacggcgaaaaaccctttattgccgcc
aaaagggtgctgcgctatttaattggcttggcggtgatcattgcgatattggcacaatat
aatgcccccgacgccgtgctaaaaggcgcggctcgcgcagggctaatggcattggctttt
tatgtgttatggctattgttatcgcgagggttaacttccaacttatcgcggcatcatatt
gactcgtcgctagaacaattgtgtaaaaataccttgtcggtagccttgattgccatgggc
accatcacagtactggcgcagtttggttttgatgtgctgtcgattgtggcgggtttaggc
atagtgggtatcgccgtgggctttgcggcgcagtcgactttggccaactttatcgccggc
attaccttactgattgagcggccgtttcgcatcggcgattgggtaaaaattcacggggaa
gaaggcaaggtgatccgcattgcctttcgcaccacttggctgcgcacccgcgataatgtg
ttcaccatgatccccaatgaaagagtggccacctcagatattattaatttcagtgtcgaa
gggcccacgcgaattcgcattcctctgggcattgcctataaagagtcggttgcccatgcc
cgagaggtgatcatgcccttgttgtcggctcatcctatggtgatcaccaatgagcaaatg
cagccacggctgcagttgcgtgagctggctgactcgtccttgaatctcagtgctcaggtg
tgggtgcatgcgaaagatatcgaagtaaaagggcgcatttcttgcgagctgttagagacc
atcaagctggcgctggatgatgccaacattgaaatgccatttccgcatttgcagttgttt
attgatgaagcgaaaggattggagccttggctaaactcagagtttaagcgacctgcggct
aaccttaagcctgatgcagagcactaa
DBGET
integrated database retrieval system
