Oculina patagonica: 144628877
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Entry
144628877 CDS
T11970
Symbol
LOC144628877
Name
(RefSeq) laminin subunit gamma-1-like
KO
K05635
laminin, gamma 1
Organism
opg Oculina patagonica
Pathway
opg04512
ECM-receptor interaction
opg04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
opg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
144628877 (LOC144628877)
04518 Integrin signaling
144628877 (LOC144628877)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
Perilipin
TpcD-like_N
F5_F8_type_C_2
Motif
Other DBs
NCBI-GeneID:
144628877
NCBI-ProteinID:
XP_078343117
LinkDB
All DBs
Position
1:complement(37698044..37729156)
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AA seq
1658 aa
AA seq
DB search
MSGISRRSNVVKFPSMVRRSPATEDYEHNTRGIIMEVCCRYRVKKHWRSFSSLLRCLALL
LFLRGADSQSPCYNEITSAPLRCMPSFGNAAFNKAVISNNTCGTPPSEFCVQTGVTDPTK
ECEICDATKERYRHPAFYITDIKGDQNRTWWQSETLLNNPDKPVTLTLDLEKSFDVSYIR
IRFRSPRPESMAIYKRTSTDPKAPWIPYQYFSASCEKSYKVKTNDIAKTNQQVLCSDDFS
SISPLTGGNVAFRTLYGRPDNLNFDNSFELQEWVTVSALRIDLDRMNTFGDEVFGDANVL
RSYYFAIIDLTVGGRCKCNGHAAECMEKQQDGRLQLRCICDHRTTGVDCERCEPLYNNRP
WARATEDSANECIKCDCNGLADSCVYDENLGFGRCENCKRNTAGPKCERCRDNFFRLTSS
DDCQACKCNPVGSVSLQCNPTGQCTCKPGVTGVKCDKCQADYFGFSQTGCRPCQCSPEGT
DPSNTQCNEKGECSCKRNVIGAKCTQCNTGFYGLESSNPHGCRQCFCYGHSSVCQEAVGY
TGRNISNQFRSGLDGWTVVNEQGTDVTEQYAVHHPGDSEDSHISVTAVGNEVLYVSAPAI
FLGDVRSSYGQLFGFSFRVASTEGVQVEPGDIILEGENGLKVSARLNAQNNPIPTTTFQN
YVFRLHEDPSLGWEPILRGFDFQKLLTSLKAIKIRMNYAPQGTGLIKNVFLESAIYDPRS
PFRVNWVEECSCPAPYTGDHCEQCSVGYTRMKGSDDEYGQCIPCQCYGHSESCDPVTGVC
NCQDNTVGNNCDACKDGYYGNPTEGTKDDCKPCPCEFGSRCILIGQNVVCTDCPAGHTGN
LCEYCQDGYYGDPSGLLGLPSGCQKCNCSGNIDVNAIGNCNSLTGDCLKCIYNTRNGPLE
RCELCAIGFYGNATEYPKPQCIACDCYNQGTVTPPGHNPEDPLPCDDKGKCACLENVIGD
KCDSCQDTYWNVGSGFGCEECLCDPMGSLNNSCDVITGQCPCKPGVTGRTCDQCQLDHYG
YSDKGCEPCNCNPEGSLNVSCNEYGECSCKFGVLGIKCDSCEENKHNLTAGCIDCPPCYN
EIQRLVNRLRINIRRLVKIVENFNSSSSSGQLVVDANFERRLKELTEAVNKLLEKAESSN
STDRALQKQLEVLNNRVDKINEVTSDVWNNTNVTEELIASAVGNISEAEASINRSRSLLD
EAESILIDKGAMALNESIHAANSSSEQAIRMAEIRNETNILADKHENEAKDVIEKANETL
NKSKQALNATEQAINEQKKTSDGIEELLRKLNRTIDLHEQAASAAEKSRDDAQNAMDEAV
ELYENGTAPLPDLGIMEMQAKLNTSKQEVANASKSAEEILNVLETLVESFDTKEEYVRKK
MAEWPGLFERLEGLLTNVTDANETAHDAIARGEETLRKAKDMLERLKKFNEIIDSSRAEA
DLAEANIAEIVRLINSANNKSDEATANLGDAQELAEEAASTAEAARDMANSTQQKAEMIK
KEAEELQIPDDNVTAPVSEAAKQLSDHKSVAEGQGQSIEDALNKTKKANEAADKAREKIA
DVLAKLLALLKEIDSVGTVNTSRLGNIDKQLENETDTVRQLDREVQAVEQQSEVIKESIK
KYTIDLEVYRAEKKLLQEMYEKLPKICPRKTPPPEGGR
NT seq
4977 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcatatcacgtagatcaaatgtcgtgaaattcccctccatggtccgccgttcg
ccagctaccgaagattacgagcataacacgagagggatcatcatggaggtctgctgtcgt
taccgtgtgaagaaacattggaggagtttttcgtctttgttgagatgtctagctctactt
ctgtttctacgaggggctgacagccagtctccatgctacaacgaaatcacttcggctcca
ctcagatgcatgccttcgtttggcaatgctgcttttaacaaggccgtcatttcaaacaac
acttgcgggacgcctccgagcgagttctgcgtgcaaaccggcgtcactgatcccacgaag
gaatgcgaaatttgcgatgcaaccaaagagaggtaccgccatcccgcattttacatcacg
gacataaaaggtgaccaaaacagaacctggtggcagtcggagacactgcttaacaaccct
gataaacccgtaacgcttacgcttgatcttgagaaaagcttcgatgtgtcctacatcaga
attcgttttcgatcgcccaggcctgagtcgatggcaatatacaagcgaacaagcaccgat
ccgaaagcgccgtggatcccctatcaatatttctcagcttcgtgtgagaaatcttataag
gttaaaaccaatgacatcgcaaagacaaatcaacaggtattatgttcagacgatttcagc
agcatttcgccccttactggaggaaatgttgcgtttcgtacgttgtacggtcggccggat
aatctgaattttgataacagctttgaattgcaagaatgggttacggtaagcgcgctccga
attgatttggatcggatgaatacgtttggagacgaagtgtttggtgatgctaacgttttg
cggagttactacttcgctattatagatttgacagtcggaggacgctgtaaatgcaacgga
cacgccgcagaatgcatggaaaaacaacaagatgggcgacttcagttgagatgtatatgt
gaccacagaacaacgggtgtagactgcgaaagatgcgaaccgctttacaacaatcgtccc
tgggccagggccacggaggatagcgccaacgaatgcattaagtgtgactgtaatggctta
gcagacagctgtgtatatgatgagaaccttggctttggacgctgtgaaaactgcaagaga
aatactgctggcccgaaatgtgagcgctgccgtgacaatttcttccgcctgacctcatca
gatgactgtcaggcttgtaaatgtaaccctgtaggctcagtgtcattacagtgcaatcca
acaggtcagtgcacctgtaaaccaggagttactggtgtcaaatgcgacaaatgccaagca
gactactttgggttttcacagactggttgtaggccttgccagtgttctcctgaaggaact
gaccccagtaacacacagtgtaatgagaagggagagtgttcatgcaaaaggaatgtcatt
ggtgccaaatgcacccaatgtaacacaggcttctatggcttggagagttcaaacccacat
ggatgtagacagtgcttttgttatggacacagtagtgtatgccaggaagccgtgggttat
actggacgaaacatttcaaatcagtttagatcaggcctggatggttggacagttgtcaat
gaacaaggaactgatgttaccgagcagtatgctgtccatcatcctggagattctgaagac
tctcacatcagtgtaacagctgtaggaaatgaggtcctttacgtatcagctccagcaatt
ttccttggagatgtccgcagcagctatggtcaactgtttggtttctcctttcgtgtggct
tctactgagggagttcaggtggaacctggtgacattattttggaaggcgagaatgggctg
aaagtgtctgctaggctcaatgcccagaacaacccaattcccactaccacatttcaaaac
tatgtgttccgtcttcatgaagatccatctctgggatgggagccaatactcagagggttt
gacttccaaaaactccttaccagtttaaaggccattaaaattcggatgaactatgcacct
cagggcactggcttgattaagaatgtgttcttagagtcggcaatttatgatccacggtct
ccattccgtgttaattgggttgaagagtgtagctgtcctgcaccttatactggtgatcat
tgtgaacaatgcagtgtgggctataccaggatgaagggatctgatgatgaatatggacag
tgcattccctgccagtgttatggccactctgagtcatgtgatccagtgacaggcgtttgc
aattgccaagacaacacagtcggcaacaactgtgatgcatgcaaagatggttactatgga
aatccaactgaaggtaccaaagatgactgcaagccgtgcccctgtgaatttgggtcccgc
tgcattctgattggccagaatgttgtttgtacagactgtcccgcgggacatacagggaat
ctgtgtgaatactgtcaagatggttactatggcgacccatcaggcctcctaggcctccct
tctggttgtcagaagtgtaactgcagtggtaacatagacgtcaatgccattggaaactgt
aattctctcactggcgactgcttaaagtgtatttacaacacaaggaatggtccgcttgag
aggtgcgaactttgtgcaatcggattttatggaaatgctactgaatatccaaaaccacag
tgtattgcttgtgactgctacaatcagggcacagtgacacctcctggccacaatcctgag
gatcccctcccttgtgatgataaaggcaagtgtgcttgcttggaaaacgtcattggagac
aagtgtgacagctgtcaagacacctactggaacgtgggctcagggtttggctgtgaggag
tgtttgtgtgatcctatgggttctctcaacaatagctgtgacgtcattaccggccagtgc
ccgtgtaaacctggcgtgacgggaaggacatgtgatcaatgtcagttggaccattatggg
tactcagacaaggggtgtgaaccttgcaactgtaacccagaaggctctcttaatgtgagc
tgtaacgaatacggcgaatgcagctgtaagtttggagttctgggaatcaagtgtgattca
tgtgaggaaaataaacataacttgactgctgggtgcatcgattgtccgccatgttataac
gaaattcagcgattggttaatcgtctgcgaatcaacatccgtagactcgtcaagatcgtt
gaaaacttcaactcgagctcgagctccgggcaactagtcgtagatgcgaactttgaacgt
cgcctgaaagaactaacagaggcagtaaataaactgctagaaaaggcagaaagctcgaat
tcgactgaccgagctctgcagaaacagcttgaggtcttaaacaaccgtgtggataaaata
aatgaggtcacatctgatgtatggaacaatacgaacgttacagaagagctcatagccagt
gcggtggggaatatttccgaagccgaggcgtcgatcaatcgatctcgttcattgcttgat
gaggcggagagcatactgatagacaagggtgccatggcgttgaatgaatcgatacatgca
gcgaacagttcctctgagcaagccataaggatggcggagatcagaaatgagaccaatata
ctggccgacaagcacgaaaatgaagccaaggacgtaattgaaaaggcaaacgaaactctc
aacaagtccaaacaagctttaaatgctacagaacaggcgataaatgaacagaaaaagaca
agcgacggcatagaagaattactgagaaagctcaacagaaccatagacttgcacgaacag
gccgcaagcgctgctgagaagtcacgtgatgacgcccagaatgcaatggacgaggctgtg
gagctgtacgagaacggaactgcgccacttcctgatctcggcataatggagatgcaagca
aaacttaacacctccaaacaagaggtcgccaacgcgtccaagagtgcggaagagatcctc
aatgtcctggaaactttggtcgagagctttgacacgaaagaagaatacgtcagaaagaaa
atggctgagtggccaggcctttttgaaagactggagggcctgttgacaaatgtcaccgac
gctaacgaaactgcgcatgacgccatcgctcgaggagaggagacgctgaggaaggccaaa
gacatgttggagagacttaagaaattcaacgaaattatcgacagttcaagagcagaggct
gatctagctgaggctaatatagcagaaatagtgcgactgatcaattcagcaaacaacaag
tcagatgaggcaactgctaacctaggagacgctcaggagctggccgaggaagcggcgtcc
actgccgaggcggcgcgtgacatggctaacagtacacaacagaaagctgaaatgataaag
aaagaagcagaagagcttcaaatccccgacgacaatgtgaccgcgccagtatcagaggcc
gctaagcagttgtcagaccacaagtccgtcgccgaaggacagggacagagtattgaagac
gcgctgaacaagaccaagaaggcaaacgaggcggcagataaagcgcgcgaaaaaatagca
gacgttctcgcaaagctgcttgcactgttgaaagagattgatagcgtgggcacggttaat
acctcacggttgggtaatattgataagcagctcgagaatgagacggatacagtgcgccag
ttggatcgtgaagtgcaagcagtggaacaacagagtgaagtcatcaaggagagcatcaag
aaatacactattgatttggaggtgtatcgagcggaaaagaaactgttacaagaaatgtat
gagaaattacccaagatatgccctcgaaaaacaccgccacctgagggagggaggtga
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