Oculina patagonica: 144632391 Help Entry 144632391         CDS       T11970                                  Symbol LOC144632391 Name (RefSeq) THO complex subunit 3-like   KO K12880   THO complex subunit 3 Organism opg  Oculina patagonica Pathway opg03013   Nucleocytoplasmic transport opg03040   Spliceosome Brite KEGG Orthology (KO) [BR:opg00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     144632391 (LOC144632391)   09122 Translation    03013 Nucleocytoplasmic transport     144632391 (LOC144632391)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:opg03019]     144632391 (LOC144632391)    03041 Spliceosome [BR:opg03041]     144632391 (LOC144632391) Messenger RNA biogenesis [BR:opg03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      144632391 (LOC144632391) Spliceosome [BR:opg03041]  Complex C   Other components    EJC/TREX     144632391 (LOC144632391)  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     144632391 (LOC144632391) SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_EML_2 ANAPC4_WD40 WDR55 Beta-prop_WDR36-Utp21_2nd EIF3I WD40_Gbeta Beta-prop_Aladin Beta-prop_WDR19_1st Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_IFT140_1st eIF2A Beta-prop_Vps41 Beta-prop_NOL10_N Beta-prop_EML WD40_RFWD3 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd DSE1_N RMC1_N Beta-prop_WDR35_TULP_N Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_HPS5 NBCH_WD40 Tricorn_2nd WDR90_beta-prop_4th PD40 Beta-prop_EIPR1 TRM82_WD PAC11 Beta-prop_WDR75_1st CFAP251_N Beta-prop_NUP159_NUP214 Beta-prop_DCAF12 Beta-prop_SPT8 TP_0598_N Beta-prop_WDR41 Beta-prop_Nup120_160 DPPIV_N Beta-prop_ELP1_1st Motif Other DBs NCBI-GeneID:  144632391 NCBI-ProteinID:  XP_078347158 LinkDB All DBs Position 1:complement(43516658..43526632) Genome browser AA seq 321 aa AA seqDB search MAGSDYLNEMRRYFENNSRTKDFVAHTAKVHSVAWSCDGRRLASGSFDRTVSIFVLEKDR LTKEANHKGHGESVDQLCWHPSNPDLLVTASGDKTIRIWDARANKCVSVVNTKGENINIC WSPDGNTIAVGNKEDLITFIDARTYKARCDEQFKFEVNEISWNNTNDLFFLTNGHGCINI LSYPDLKPQQTLHAHPANCICIKFDPKGRYFATGSADALVSLWDLDELVCVRTFSRLDWP VRTLSFSHDGEMLASGSEDLIIDIAMVETGERICEVQCNAPTFTVAWHPQKPLLAFACDD KDKHDRDAGTVRLFGLPANSS NT seq 966 nt NT seq  +upstreamnt  +downstreamnt atggcgggtagtgattacttgaacgaaatgcggcggtactttgaaaataactcaagaaca aaagactttgttgcccatacagccaaggttcattccgtggcgtggagctgtgatggcaga agacttgcctcaggatcttttgacagaactgtcagtatttttgtgcttgaaaaagatcga ttgacaaaagaagcaaaccataaaggtcatggtgagagtgttgatcagctctgttggcac cctagcaatcctgatctccttgtgacggcgtcaggagataaaactattagaatatgggat gccagagctaataagtgtgtgtctgtagtaaataccaaaggagaaaacatcaacatatgt tggagtcctgatggtaacacgatagcagtaggaaataaggaagatctaataacatttata gatgccagaacgtacaaagcaaggtgtgatgaacaatttaaatttgaggttaatgaaatt tcctggaacaacacaaatgatttatttttccttacaaatggtcatggatgtatcaatata ttaagttaccctgatttaaagccacaacagacgttacatgctcatcctgctaactgtata tgtataaagtttgatcccaagggaagatactttgccactggaagtgccgatgctttagta agtctatgggatctagatgagctggtttgtgttagaacattctcaagattagactggccg gtcagaacactgagtttcagtcatgatggtgagatgttagcgtcaggctctgaggatctt atcattgacatagcaatggtagagacaggcgagagaatatgtgaagtgcaatgtaatgct ccaacgtttacagtagcctggcatccacagaaacctctattagcttttgcttgtgatgat aaggataaacacgatcgtgatgcaggcactgtacgtctgtttggtttaccagccaactct tcgtaa

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