KEGG   Oculina patagonica: 144636706
Entry
144636706         CDS       T11970                                 
Symbol
LOC144636706
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1-like
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
opg  Oculina patagonica
Pathway
opg03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:opg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    144636706 (LOC144636706)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:opg03400]
    144636706 (LOC144636706)
DNA repair and recombination proteins [BR:opg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     144636706 (LOC144636706)
SSDB
Motif
Pfam: Tyr-DNA_phospho zf-CCHH Mus304_C
Other DBs
NCBI-GeneID: 144636706
NCBI-ProteinID: XP_078352024
LinkDB
Position
13:9814618..9835569
AA seq 532 aa
MSGKKPRDRKSDTRPVCKYGAECYRKNPAHFEEYRHPDYDSDTDDDYDELEKSPPTKRQK
IDDNTTASTSSSSSPSRNTKSKDESCLPFLLTSVRGIPSEFNARNLAIGIKDILSNKMGD
LEASAQFNYMFDIPWLIEQYPKDKRSKPLLIVHGNQREARAELQKEAEPYPNITLFGARL
EAYGTHHSKMMFLLYKEGIKVVITTANLIAMDWDQKTQGVWMSPLFPKLSKPSSSQSKSS
SPTNFKEDLLEYLAAYGGSAFNEWKEHIRQHDMSSARVRLIASVPGRHTGLNKTKWGHLK
LRKVLHQHGPSSDDVSSKWPVIGQFSSIGSLGNDKDRWLCSEWLQSLSTCSGNMMSRPAL
HLLFPTVDDVRHSLEGYPAGGSLPYSSKTAVKQPYLTRFLCSWKSRSCGRSRASPHIKTY
TRISPDWNQVAWFLMTSANLSKAAWGTLEKNGQQLMIRSYEIGVLFLPKDQDPGSKYFHV
KGKQQSKEKSSSCSVQLPFDVPPSPYTKDESPWMWDVKYNTPDCHGRIWSPS
NT seq 1599 nt   +upstreamnt  +downstreamnt
atgagtgggaaaaagccaagagatagaaagagcgacactcgaccggtctgcaagtatgga
gccgagtgttatcgtaagaatcctgctcattttgaggagtatcggcacccagattatgac
tctgacactgatgatgattatgatgagttagagaagtctcctccaaccaaacggcagaag
atagatgataacacaactgcaagtacatcatcatcatcatcaccctcaagaaataccaaa
agcaaggatgaaagctgtttgccatttttgttgaccagtgtgcgtggaattccatcagaa
ttcaatgccagaaatttagcaattggcattaaagatatcctttcaaataagatgggtgac
ttagaggcttcagctcagttcaactacatgtttgacatcccatggttgattgaacagtat
cctaaagataaaaggtccaaacctttgcttattgttcatggaaatcagagagaagcaaga
gctgaacttcaaaaagaggctgaaccatatccaaatatcacactgtttggtgccaggcta
gaagcatatggaacacatcacagcaaaatgatgttcttgttgtataaagaaggtattaaa
gtggtcatcactacagctaatctgattgccatggattgggaccaaaagacgcagggggtc
tggatgagtccattatttccaaaactttcaaagccatcttcatcacaatccaaaagttct
tcaccaactaatttcaaggaggatttattggagtatctagcagcatatggaggttccgca
tttaatgagtggaaagaacatatccgtcaacatgatatgtcctctgcaagggttcgcttg
atagcttcagttcctggaagacacacagggctcaataaaaccaaatggggccatcttaaa
ctgcgtaaggtactacaccagcacggtcctagttctgatgacgtcagctcaaaatggcct
gtaattggtcagttttctagcattggatcccttggaaatgacaaagatcgttggttgtgc
tctgagtggttacaaagcttgtctacttgctctgggaacatgatgtcgaggcctgccctg
catctgctttttcccacagtagacgatgtgcggcacagtttggaaggctatccagctggc
ggatctctgccatacagctccaaaacagcggtgaaacagccttaccttacacgttttctt
tgttcctggaaatctcgtagctgtggcagaagtcgcgcctctccgcacattaaaacctac
accaggatatcccctgactggaaccaggtggcctggtttctaatgacaagtgcaaatttg
tcaaaagcagcttggggaacactcgagaagaatggtcagcaactaatgatccgttcctac
gagatcggagttttatttctgccaaaagaccaggatcctggcagcaagtacttccacgtg
aaaggaaaacagcaaagcaaagagaagtcgtcgagttgcagtgtacaacttccatttgat
gttccaccttcaccttacaccaaagatgaatctccctggatgtgggacgtcaagtacaac
acaccggattgtcatggcagaatatggtcaccatcttaa

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