Oculina patagonica: 144643329
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Entry
144643329 CDS
T11970
Symbol
LOC144643329
Name
(RefSeq) nucleolysin TIAR-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
opg
Oculina patagonica
Brite
KEGG Orthology (KO) [BR:
opg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opg03019
]
144643329 (LOC144643329)
03041 Spliceosome [BR:
opg03041
]
144643329 (LOC144643329)
Messenger RNA biogenesis [BR:
opg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
144643329 (LOC144643329)
Spliceosome [BR:
opg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
144643329 (LOC144643329)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_10
RRM_7
RRM_PARP14_3
RRM_5
Nup35_RRM_2
RRM_ACIN1
RRM_MUD2_C
Motif
Other DBs
NCBI-GeneID:
144643329
NCBI-ProteinID:
XP_078358666
LinkDB
All DBs
Position
2:complement(18566338..18585749)
Genome browser
AA seq
396 aa
AA seq
DB search
MDDLDDKKTSLYVGNLDRRCTEQFIEDIFSKCGKVVRCKMINASSSTDPYCFVEFETKEA
AEYALFAMNNRNVYDKNIKVNWATNNTGGMRKDTSNHYHIFVGDLDSEINNDGLYKAFAA
FGQVTDCRVVKDNTSGKSKGYGFVSFLKKEDAERAMREMKGQQLKGRNIRTNWAARKAAP
SQNTKQLSMDEIQRQASPYNSTVYVGNLPPGCTDDTLRQNFSQFGQIYDIKIFPEKFYGF
IKFYTHDQALEAIYQSQRTVLGDNVLKCSWGKENAEINNAHQQQWQQYYQQYYQQFYGQQ
PMQQQAQAQAGYVQYPTAAAAQYVYYPQQAFGNQPMQVVPAHMGYPAQMAPASSAGQQPP
AQTQQMMGMIGHHQGAPAPANATSYVMQQAAGYPTQ
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccttgacgacaagaaaacaagcctctatgtcggaaacttagatcgacgttgt
acagagcagtttatcgaggatattttctcaaaatgtggaaaggttgtgcgatgcaagatg
attaatgcgagttcctcaactgatccttactgcttcgtagaatttgaaaccaaagaagcg
gcagaatatgcactttttgcgatgaataataggaatgtatatgacaagaatatcaaggtg
aactgggcgacgaataacacaggaggcatgaggaaggatacaagtaatcattaccacata
tttgtgggtgaccttgattcagaaattaacaatgatggtctttataaagcttttgctgct
tttggacaagtaacggattgtcgcgtggtgaaagataatacttctggaaagtctaaagga
tatggttttgtgtcatttctcaaaaaggaggatgcagaaagagccatgagagagatgaaa
ggacaacagttgaaaggaaggaacatacgaactaattgggctgctcggaaagcagctccc
tcacagaatacgaagcaactgtcaatggatgaaatacaaagacaagcatctccatataac
tctactgtttatgttgggaatcttccacctggctgcactgatgacacacttcgtcagaac
ttttcacagtttggacagatctatgacatcaaaattttcccagagaagttttatggattt
atcaaattttatacacacgatcaagctttagaagcaatttaccaatcacagagaacagta
ttaggagataatgtattgaaatgttcttgggggaaggaaaatgcagaaataaacaatgca
catcagcagcagtggcagcagtactatcagcagtattaccaacagttctatggtcagcag
cctatgcagcagcaggcccaagctcaggcagggtatgttcagtacccaacagcagcggca
gcgcagtatgtctactatccacagcaggcctttggaaaccagccgatgcaagttgttcct
gcacatatgggataccctgctcaaatggcgccagcatcctcagctggtcagcagcctccc
gcgcagacacaacagatgatgggcatgataggacatcaccaaggggcgcccgcccctgcc
aatgcaacttcttacgtcatgcagcaggctgcaggatacccaacacagtag
DBGET
integrated database retrieval system
