Oculina patagonica: 144644252
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Entry
144644252 CDS
T11970
Symbol
LOC144644252
Name
(RefSeq) small ribosomal subunit protein RACK1-like
KO
K14753
guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
opg Oculina patagonica
Pathway
opg03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
opg00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
144644252 (LOC144644252)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opg03019
]
144644252 (LOC144644252)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
opg04147
]
144644252 (LOC144644252)
Messenger RNA biogenesis [BR:
opg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
144644252 (LOC144644252)
Exosome [BR:
opg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
144644252 (LOC144644252)
Exosomal proteins of colorectal cancer cells
144644252 (LOC144644252)
Exosomal proteins of bladder cancer cells
144644252 (LOC144644252)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
WD40_Gbeta
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_EIPR1
TRM82_WD
DSE1_N
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_DCAF12
CFAP251_N
Beta-prop_WDR41
ANAPC4_WD40
Beta-prop_NOL10_N
Beta-prop_VPS8
ASA1
Beta-prop_DCAF4
PAC11
Beta-prop_WDR75_2nd
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Cytochrom_D1
Beta-prop_ACSF4
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
144644252
NCBI-ProteinID:
XP_078359828
LinkDB
All DBs
Position
2:33359719..33364389
Genome browser
AA seq
315 aa
AA seq
DB search
MAEGLTLKGTLKGHNGWVTQIATNPQHPDKILSGSRDKTLIVWKLKCEETNYGEALKSLT
GHNHFVSDVVMSSDGQFALSGSWDSTLRLWDLNAGTTTRRFVGHTKDVMSVAFSADNRQI
VSGSRDKTIKLWNTLGVCKYTIMDEGHSEWVSCVRFSPNSSNPIIVSASWDKIVKVWNLT
NCRLKTNHIGHTGYLNCVTVSPDGSLCASGGKDGMAMLWDLNEGKHLYTLDGGDILNSLC
FSPNRYWLCAAAGPSIKIWDLEAKSIVDELRPDVINMGGKAPPAQCISLAWSADGQTLFA
GYTDNLIRVWQVTRV
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggctgagggactaactcttaaaggaacactaaaggggcacaatggctgggtaacacaa
attgccaccaatcctcaacatccagacaagattttgtccggatctcgggataaaacactc
attgtgtggaaacttaaatgtgaagagaccaactatggtgaggctttgaagtctctaaca
ggccacaatcattttgtttctgatgtggtcatgtcatcagatggtcagtttgcactctct
ggctcatgggacagcacactcagactgtgggatcttaatgctggcaccaccacacgccgt
tttgttggtcacaccaaagatgttatgagtgttgcattttctgctgataaccgtcagatt
gtgtccggatcacgtgacaagaccatcaagctgtggaacaccctaggtgtctgcaagtac
accattatggatgagggacactctgaatgggtatcctgtgtaaggttttcaccaaactca
agtaatccaatcattgtgtctgccagctgggacaaaattgtcaaggtttggaacctgaca
aattgccgtctaaagaccaaccacattggacacactggatatctgaactgtgtgactgtg
tcaccagatggctctctgtgtgcgtctggtgggaaggacggtatggccatgctgtgggac
ttgaatgagggaaaacacttgtacacccttgatggaggtgacatcctgaactccctgtgt
ttcagcccgaacagatactggctgtgtgcggcagcaggacccagcatcaagatttgggat
cttgaggctaagtcgatcgtggatgagctgcgaccagatgtaatcaacatgggaggcaaa
gccccaccagctcagtgcatctcgcttgcgtggtcagctgatggccagactctgtttgct
ggttacacagacaacttgatccgtgtgtggcaagttactcgagtttaa
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