Obesumbacterium proteus: DSM2777_02135
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Entry
DSM2777_02135 CDS
T04310
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
opo
Obesumbacterium proteus
Pathway
opo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
opo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DSM2777_02135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opo03019
]
DSM2777_02135
03400 DNA repair and recombination proteins [BR:
opo03400
]
DSM2777_02135
Enzymes [BR:
opo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DSM2777_02135
Messenger RNA biogenesis [BR:
opo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DSM2777_02135
DNA repair and recombination proteins [BR:
opo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DSM2777_02135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
ResIII
Hanta_Gn-B
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AMO79955
LinkDB
All DBs
Position
complement(434255..436093)
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AA seq
612 aa
AA seq
DB search
MATAAVINAEMLAEQVLRDTFGYQQFRPGQQTIINAAIAGRDCLVVMPTGGGKSLCYQIP
ALVMDGLTLVVSPLISLMKDQVDQLQANGVSAACLNSTQNREQQQEVYAGCRSGAIKLLY
IAPERLMMDNFLDQLPHWRPALLAVDEAHCISQWGHDFRPEYSALGLIKQRFPEIPVIAL
TATADDATRNDIERLLSLNDPLVQVSSFDRPNIRYTLIEKFKPLDQLIRFVQEQRGKSGI
IYCNGRAKVEDTTARLQSRGFSVGAYHAGLDHEHRSSVQEAFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIEAYYQETGRAGRDGLPAEAVLLYDPADMAWLRRCLEEKPEGQQ
KEIERHKLNAMNAFAEAQTCRRLVLLNYFGEGRQESCGNCDICLDPPKRYDGLEDAQKAL
SAIARVGQRFGIGYVVEILRGANNTRIREFGHDKLKVYGLGRDHTTEHWVSVLRQLIHLG
LVTQNIAMHSALQLTESARPVLRGEVPLQLAVPRVINLKSRSSSSHASKNYGGNYDRKLF
AKLRKLRKAIADEENIPPYVVFNDATLLEMSEQMPIRASELLSINGVGQRKLDRFGAPFM
TLIREHVDGDDE
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
gtggcaacggcagccgtaatcaatgcagaaatgctggcagaacaggttttgcgcgatact
tttgggtatcagcagttccgtcctggacagcaaactatcatcaatgctgcgatcgcggga
cgggattgtctggttgtgatgccaaccggaggcggcaagtctctgtgttatcaaatccct
gcgttggtgatggatggcttaacgctggtggtttctccgttgatttccctgatgaaagat
caggtcgatcagctacaggcgaacggtgttagcgcggcctgtcttaactccacgcagaac
cgtgaacagcagcaagaggtatacgctggctgtcgcagtggggcgataaaacttctctat
attgcgccagaacgactgatgatggataacttcctcgatcagcttccgcactggcgacct
gcattattggcggtagatgaagctcactgtatttcacagtggggccatgatttccgtcct
gaatacagcgcgctaggtctgattaagcagcgtttccctgagattccggttattgcgctc
acggccaccgccgatgatgccacgcgtaatgacatcgagcgtttgctatcgctaaacgac
ccgctggttcaggttagcagttttgaccgcccaaacattcgttacacgctcatcgaaaaa
ttcaaaccgctggatcaactgatccgtttcgtgcaggaacaacgcggcaaatcgggcatt
atttactgtaacggccgagccaaagtcgaagacaccacggcgcgtttgcaaagccgaggc
tttagcgtcggggcgtatcacgcagggctcgatcacgaacatcgttcttcggtacaggaa
gcatttcaacgcgacgatctgcagattgtggtggcaacggttgcgttcggcatgggtatt
aacaagcccaacgtgcgttttgtggtgcactttgatattccacgtaatatcgaagcttac
tatcaggaaaccggtcgcgctgggcgcgatggtttacccgctgaagccgttctgctttat
gacccagccgatatggcttggctgcgccgttgtttagaagagaaacctgaagggcagcag
aaagagattgaacgccataagctaaacgcaatgaatgctttcgctgaggcgcaaacctgc
cgtcgtttagtgctgctgaattactttggtgaagggcggcaagaatcctgcggcaactgt
gatatctgtctcgatccgccaaaacgttacgatgggctagaggacgcgcaaaaggcgctg
tcagcgattgctcgcgtgggtcagcggtttggtattggctatgttgttgagatcctgcgc
ggggcgaataacacccgtatccgtgagtttggccacgacaagctcaaagtctatggattg
ggtcgcgaccatacgaccgaacactgggtcagcgtattgcgccagcttattcatctgggc
ttagtgacgcaaaatattgcgatgcattcagcgttgcagctgactgaatcggcgcgtccg
gttttacgcggcgaagttcctcttcagctggccgtgccacgcgtcataaacctcaagtcg
cgcagcagcagtagccacgccagcaaaaactacggcggaaactatgaccgcaagctgttt
gccaagctgcgtaagctacgcaaagcgattgctgacgaagagaatatcccgccatacgtg
gtatttaacgatgctacgttgctagaaatgtcagagcagatgccgattcgcgccagcgaa
ttgctgagcattaacggtgtaggacagcgtaaactggatcgctttggtgcgccgtttatg
acgctgatccgagaacacgttgatggcgatgatgagtag
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