Obesumbacterium proteus: DSM2777_02165
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Entry
DSM2777_02165 CDS
T04310
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
opo
Obesumbacterium proteus
Pathway
opo03420
Nucleotide excision repair
opo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
opo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DSM2777_02165 (uvrD)
03430 Mismatch repair
DSM2777_02165 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
opo03400
]
DSM2777_02165 (uvrD)
Enzymes [BR:
opo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DSM2777_02165 (uvrD)
DNA repair and recombination proteins [BR:
opo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DSM2777_02165 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
DSM2777_02165 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
PhoH
AAA_22
DUF4391
Motif
Other DBs
NCBI-ProteinID:
AMO79961
LinkDB
All DBs
Position
complement(440753..442915)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSDLLNSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLSVENCSPFSIMAV
TFTNKAAAEMRHRIEHLIGTSQGGMWIGTFHGLAHRLLRAHHLDANLPQDFQILDSDDQL
RLLKRIVKALNLDEKQWPPRQGMWYINNKKDDGLRPQHIESYGNPVEQTWLRVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPQILNHYRERFTNILVDEFQDTNRIQYAWIQMLAGNS
GKVMIVGDDDQSIYGWRGAQVENIQRFLDDFPGAETIRLEQNYRSTSNILKAANALIENN
DGRLGKKLWTEDGDGEKISLYCAFNELDESRFVVNRIKAWQDNGGSLNDCAILYRSNAQS
RVLEEALLQVAMPYRIYGGQRFFERQEIKDALAYLRLISNRNDDAAYERVVNTPTRGIGD
RTLDVIRQAARDRQLTLWQATHELIQEKVFAGRASGALQRFIELIDALANDTADMPLHVQ
TDRVVRDSGLRQMYEQEKGEKGQTRIENLEELVTATRQYSYEDEDEDLLPLQAFLSHAAL
EAGEGQADAYQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMRKLTITYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRASVTRPVKHASMG
TPISANDSGFKLGQRVKHATFGEGTVINLEGSGEHSRLQIAFQGEGIKWLVAAYAKLEAM
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttccgatctgctcaacagccttaacgataaacaacgcgaagccgttgctgcg
ccacgcagtaaccttctggtgctggctggagccggaagcggcaagacgcgcgtcttggtg
catcgcatcgcgtggctgctgtcggtagaaaactgttcgccgttttcgattatggccgtc
acctttaccaacaaagccgccgcggaaatgcgccaccgtatcgaacatctgattggcact
agccaaggcggcatgtggatcggtactttccacggtttggcgcaccgcctgctgcgcgcg
catcatctggatgccaatctgccgcaggatttccaaatccttgatagcgatgaccagctt
cgtttgctcaaacgtatcgttaaggcattgaatctggatgagaaacagtggccgccgcgt
caaggcatgtggtacatcaacaataaaaaagatgatggactgcgtcctcagcacattgaa
agctacgggaatcccgtagaacagacgtggctgcgcgtctatcaggcctatcaagaagcc
tgcgatcgtgcggggctggtggatttcgccgaactgctattgcgcgcccacgagctatgg
ctcaataaacctcaaatcctcaaccactatcgcgagcgtttcaccaatattctggtggac
gaattccaagataccaaccggattcagtacgcatggatccagatgctggcaggcaatagc
ggcaaagtgatgattgttggcgatgacgatcagtcgatctacggctggcgtggcgctcag
gttgagaatatccaacgttttctggatgattttcccggtgctgagactatccgcttagaa
caaaactaccgctcaaccagcaatatactgaaagccgcgaacgccttaattgaaaacaac
gatgggcgcttgggtaaaaagctgtggaccgaagacggcgacggcgaaaaaatttcgctc
tactgcgcgtttaatgaattggatgaatcacgttttgtggtgaatcgcattaaagcgtgg
caggacaacggcggctctcttaacgactgcgccattctttatcgtagcaacgcccaatcg
cgtgtattggaagaggcgctgttacaggtggcaatgccataccgtatttacggtggacaa
cgattcttcgaacgtcaggaaatcaaagatgcgttggcttatttacgcctgatttccaac
cgtaatgatgatgcggcatatgagcgtgtggtcaacacaccaacgcgcggcattggtgat
cgcacgctggacgttattcgccaagctgcacgcgatcgtcagctgacgctatggcaggcc
acgcacgagctgatccaagaaaaagtatttgctgggcgagcctcaggtgcactacagcgc
tttatcgaactgattgatgccttagccaatgatacggccgatatgccgctgcatgtacag
acagaccgcgtagtgcgcgattcgggtctgcgccagatgtatgagcaagaaaagggtgaa
aaaggccaaacgcgtattgagaacttagaggaactggtgaccgctacgcgccagtacagc
tatgaggatgaagacgaggacttgctgccgttgcaggcattcctgtcgcatgcggcgctt
gaagccggtgaagggcaggcagacgcctaccaagacgcggttcagctcatgacgctgcac
tcggcgaaaggtctggagttcccgcaggtgtttatcgtggggatggaagaggggatgttc
ccaagccaaatgtcgctggatgaaggcgggcgtttggaagaagaacgtcgcttggcctac
gttggggtgacgcgagcgatgcgaaaactgacgatcacctatgcggagactcgccgcctg
tatggcaaagaagtttatcaccgtccatctcgttttattggtgagttgccagaagagtgc
gtggaagaggtgcgcctgcgggcaagcgttactcgccccgttaagcacgccagcatggga
acgccaatcagcgccaatgacagcggttttaaactcggtcagcgggtcaaacacgctacg
tttggtgaaggtacggtgatcaatctggaaggtagcggtgagcatagtcgcttacagatt
gcgtttcagggcgaaggcattaagtggctggttgcggcttatgccaagttagaggcgatg
taa
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