Obesumbacterium proteus: DSM2777_02320
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Entry
DSM2777_02320 CDS
T04310
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
opo
Obesumbacterium proteus
Pathway
opo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
opo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DSM2777_02320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opo03019
]
DSM2777_02320
Enzymes [BR:
opo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DSM2777_02320
Messenger RNA biogenesis [BR:
opo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DSM2777_02320
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CCDC138_C
ERCC3_RAD25_C
SwaI-like
Motif
Other DBs
NCBI-ProteinID:
AMO79984
LinkDB
All DBs
Position
470985..472274
Genome browser
AA seq
429 aa
AA seq
DB search
MSKTHLTEQKFADFALHPTVVKALESKGFHNCTPIQALALPLTVNGRDVAGQAQTGTGKT
LAFLASTFHYLLTHPAAENRKTNQPRALIMAPTRELAVQIHSDAEALAHETGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQGHIDLACIQVVVLDEADRMFDLGFIKDIR
WLFRRMPATNQRLNMMFSATLSYRVRELAFEHMNNAEYIEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPDRCIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILD
DFTKGNLDILVATDVAARGLHIPLVTHVFNYDLPDDCEDYVHRIGRTGRAGESGYSITLA
CEEYVLNLPAIETYIEHSIPVSKYNSDALLTDLPAPKRLTRPRSNSGQRRSSGPRRNNGS
MRQSRKRSS
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacacttaactgaacagaagttcgccgacttcgccctgcaccctacggtg
gtcaaagcccttgaatctaaaggctttcataactgcacgcctattcaggcactcgcatta
cccctgacagtgaacgggcgtgatgttgcaggtcaggcgcaaacaggcaccggtaagacg
ctggcatttttagcgtcaactttccattatttacttactcaccctgccgcagagaaccgt
aaaaccaatcagccaagagcgctgattatggctccgacacgtgagttagccgttcaaatc
cactccgatgctgaagctttagcgcatgaaactggcctgaaattaggcttggcctacggc
ggtgacggttatgacaaacagcttaaagttctcgaaagcggcgttgatatcctgatcggc
accaccggtcgccttatcgattatgcaaaacagggccatatcgacctagcctgtattcag
gtagtggtgcttgatgaagccgaccgcatgttcgatcttggctttatcaaagacatccgc
tggctattccgtcgcatgcctgcgaccaatcaacgcctcaatatgatgttctctgccacg
ctgtcataccgcgtgcgtgaactggctttcgagcacatgaacaacgccgaatatattgaa
gtcgagccagaacaaaaaacgggtcaccgtattaaagaagagctgttctatccttctaat
gaagaaaaaatgcgtttgctgcaaacgttaatagaagaagagtggccagatcgctgcatt
attttcgccaataccaagcaccgctgtgaagatatctggggccacttagccgcagacgga
catcgcgttggtttgctgaccggtgatgtagcgcagaaaaaacgcctgcgtattctggac
gatttcaccaaaggcaatctcgatattctggttgcgactgacgttgcggcacgtggatta
catattccactggtgacacacgtctttaactacgacttgcctgatgactgcgaagactac
gttcaccgcattggccgtacaggccgcgctggcgaaagcggttattccatcacgctagcg
tgtgaagaatacgtattaaatttaccggcaattgaaacttatattgagcattcaattcca
gtaagtaagtacaacagtgacgcattgctgactgatttacctgcaccgaagcgcttaact
cgccctcggagtaacagcggccaacgccgtagctcaggcccgcgccgtaataacggttcg
atgcgtcaaagccgtaaacgttcgagttaa
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