Obesumbacterium proteus: DSM2777_03160
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Entry
DSM2777_03160 CDS
T04310
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
opo
Obesumbacterium proteus
Pathway
opo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
opo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DSM2777_03160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
opo03400
]
DSM2777_03160
Enzymes [BR:
opo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DSM2777_03160
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DSM2777_03160
DNA repair and recombination proteins [BR:
opo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DSM2777_03160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AMO80136
LinkDB
All DBs
Position
638567..639376
Genome browser
AA seq
269 aa
AA seq
DB search
MPELPEVETSRRGIEPFLVGHSIEHLVVRQPKLRWPVSDELLRLSDKPVLSVQRRAKYLL
IELADGWIIVHLGMSGSVRILPADEPPQKHDHVDMILSSGMMLRYTDPRRFGAWLWCKDL
DSSNVLAHLGPEPLSDEFDGDYLYQKSRSKKTAVKAWLMDNKVVVGVGNIYASESLFTAR
ISPDRPAGSLTRKDADVLVATIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRA
GEACRVCGEKILSGKHGQRTTFFCPRCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgccagaactaccagaagtagaaaccagtcgccgcgggatcgaaccctttttagtcggc
cattcaatcgaacatcttgtggttcgccagcctaaactccgatggccagtctctgatgaa
ctgcttcgattaagcgataagccagtgcttagcgtgcagcgccgcgccaagtatttgctg
attgagttggcagatggatggattatcgttcatcttggtatgtctggtagcgttcgtatc
ttacccgccgatgagccccctcaaaaacatgaccatgtcgatatgatcttgtcgagtggc
atgatgctgcgttacaccgacccacgccgctttggtgcttggctgtggtgtaaagattta
gactcatccaatgtgttagcccatcttggccctgagccactcagtgacgagtttgatggt
gattatctctatcagaagtcgcgtagtaagaagacggccgtgaaggcgtggctaatggat
aataaggtggttgtgggcgtcggaaatatttatgccagtgagtcactgtttaccgcacgc
attagccccgatcggccagcaggttcattaacgagaaaagatgctgatgtgctggtggca
accataaaagcagtgctactacgttcgattgaacagggtggtacgactttgaaagacttt
ttgcagtctgatggtaagccgggatattttgcgcaggaactacaggtctatggtagagca
ggggaagcatgccgagtgtgcggcgagaaaatactgagcggaaagcacgggcagcgcacg
acgtttttttgtccacgctgccagaagtag
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