Obesumbacterium proteus: DSM2777_12870
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Entry
DSM2777_12870 CDS
T04310
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
opo
Obesumbacterium proteus
Pathway
opo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
opo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DSM2777_12870 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
opo03400
]
DSM2777_12870 (sbcB)
Enzymes [BR:
opo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
DSM2777_12870 (sbcB)
DNA repair and recombination proteins [BR:
opo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
DSM2777_12870 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DSM2777_12870 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DSM2777_12870 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AMO81836
LinkDB
All DBs
Position
complement(2701023..2702444)
Genome browser
AA seq
473 aa
AA seq
DB search
MSKAAPTFLIHDYETLGQHPALDRPAQFAGVRTDADFNIIEEPLVIYCRPADDYLPQPEA
VMITGITPQVALERGVSEAEFARQINQMFSVPGTCIMGYNNIRFDDEVSRNIFYRNFYDP
YGYSWQNGNSRWDLLDVLRTCYALRPEGINWPENDEGLPSFKLEHLSKANGIEHENAHDA
MADVYATIALAKLVKQAQPKLFDYLFQLRNKHKVSALIDIANMKPLVHISGMFGALRGNT
SLVAPLAWHPDNKNAVIMCDLAGDMSPLLDLDTDALRERLYTRRSELGTASPVPLKLVHI
NKCPVLAPDQTLRPENAERLGLDRQRCMDNLQLLRSHPELRDKVVAVFAEAEPFKASEDV
DAQLYDGFFSDADRTAMQIIRETLPQNLPALDLTFNDKRVLPLLFRYRARNFPATLTDDE
QRRWQLHRQAALTPERVQTYIHQLEELYNRHEENPEKLAQLKELYEYAKQLVG
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
ttgagcaaggccgcgcccacgttcctcatccacgactacgaaacccttggtcaacatccg
gcactagatcgccctgcccagtttgctggcgtgcggacagacgctgatttcaacatcatt
gaagaacctttggtgatctattgtcgccctgctgatgattatcttcctcagccagaagcc
gtcatgatcacaggcatcacgcctcaggtggctttagagcgtggggttagcgaggccgag
tttgcacggcaaataaatcagatgtttagcgtgcccggcacctgcattatgggctacaac
aatattcgttttgatgatgaagtcagccgcaatatcttttatcgtaacttttatgatcct
tacggatacagctggcaaaacggcaattcacgctgggatttgctcgatgttttacgcact
tgctacgcgctgcgccctgaagggatcaactggccggaaaacgatgaaggtttaccgagt
tttaagctagaacatttgtcaaaagccaacggcatcgagcatgaaaatgcccatgacgcc
atggccgacgtttatgccaccatcgcgctggccaagttggtgaaacaagcccagcccaag
ctgtttgattacttattccaactcagaaataaacacaaagtttcagcgctgattgatatc
gccaacatgaaaccgctggtgcatatttctggcatgtttggcgctctgcgcggcaacacc
agcttagttgcgccgctggcatggcatcctgacaataaaaatgcggtgatcatgtgcgat
ctggctggcgatatgtctccgctgttagatctggataccgatgccctgcgcgaacgcctc
tatacacgccgcagcgaacttggcaccgcgtctcccgttcctctcaaactggtgcatatc
aacaaatgtccggttcttgcgcctgatcagaccctgcgccctgaaaatgccgaacgatta
gggctcgatcgtcaacgttgcatggataacttacagcttttgcgtagccatcccgagctg
cgagacaaagttgtcgcggtatttgcagaagccgagcctttcaaagcatcagaagacgtt
gacgcccagctgtatgatggtttctttagcgatgcagaccgaacggcaatgcaaattatt
agagaaaccctgccgcaaaatcttccggctctcgacctgacgtttaacgataaacgcgtt
ctacctttactgttccgctatcgcgcacgtaacttcccagcgacgcttaccgatgatgaa
caacgtcgctggcaactgcatcgccaagcagcactaacgcctgaacgtgttcaaacctat
attcatcagttggaagagctgtataaccgccatgaagaaaacccagagaaattggcccag
cttaaagaactgtatgaatatgcaaagcagttagtcggttaa
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