Obesumbacterium proteus: DSM2777_22815
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Entry
DSM2777_22815 CDS
T04310
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
opo
Obesumbacterium proteus
Pathway
opo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
opo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DSM2777_22815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opo03019
]
DSM2777_22815
03009 Ribosome biogenesis [BR:
opo03009
]
DSM2777_22815
Enzymes [BR:
opo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DSM2777_22815
Messenger RNA biogenesis [BR:
opo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DSM2777_22815
Ribosome biogenesis [BR:
opo03009
]
Prokaryotic type
rRNA helicases
DSM2777_22815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
UTP25_NTPase-like
AAA_30
LisH_WDR26
Motif
Other DBs
NCBI-ProteinID:
AMO83624
LinkDB
All DBs
Position
complement(4873302..4875236)
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AA seq
644 aa
AA seq
DB search
MAEFETSFADLGLAAPIIQALTDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAF
SLPLLHNIDPSLKAPQVLVLAPTRELAVQVSEAMADFAKHMNGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLNLSNLSGLVLDEADEMLRMGFIEDVETIMAQIPAQ
HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSITTRPDISQSYWTVFGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERNGYSSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVDRISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERIMKLTIPEVEIPNAELLGQRRLAKFAAKVQQQLESSDLDKYRDLLTKLQPEDELDMET
LAAALLKMAQGERPLILPPDPVMERRPRREFRDRDDRNERGGDRFARRGDREPREAREGA
APRRERREAGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELP
KGMPGDLLSHFTRTRILNKPLNMQLMGDAPAREPRRERPAGDRGGRNFGGGREGGERRNF
GGRDGAPRRDDRRGNSDRSAAPRGPRRDDAAQPPRRRTPTSNDA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggctgagttcgaaacttcttttgctgacctagggttagctgcaccaattatccaagcc
ctgaccgatctgggctacgaaaaaccgtctcctatccaggcggaatgtattcctcacctt
ttaaatggccgtgacgttctgggtatggctcagaccggttccggtaaaacagctgcgttc
tctttgccgctgctgcacaatattgatccaagcctgaaagcaccacaggtgctggttctg
gctccaactcgtgagctggcagttcaggtttctgaagcgatggctgacttcgctaaacac
atgaacggcgtaaacgttgttgctctgtacggtggccaacgctacgacgtacagctgcgc
gctctgcgtcaggggccacaaattgttgtgggtactcctggtcgtctgctggaccacctg
aaacgtggcaccctgaacctgtctaacctgagcggtttggttctggacgaagcggatgaa
atgctgcgtatgggcttcatcgaagacgttgaaaccatcatggcgcagatcccagcacag
caccaaacggcgctgttctctgcaactatgccagaagctattcgtcgtattacccgtcgc
ttcatgaaagagccacaggaagtacgcattcagtcaagcattaccacgcgtccagacatc
agccagagctactggactgtgttcggtatgcgtaaaaacgaagcgctggttcgtttcctt
gaagctgaagatttcgatgctgcaatcatcttcgtacgtaccaaaaacgccactctggaa
gttgcagaagcgttggaacgtaacggttacagcagcgctgcactgaacggcgatatgaac
caggctctgcgtgagcagactctggagcgtctgaaagacggtcgtttggatatcctgatt
gcaactgacgttgctgcacgtggtctggacgttgaccgtatcagtctggttgttaactac
gacatcccgatggactcagagtcttacgttcaccgtatcggtcgtaccggtcgtgctggc
cgtgcaggtcgcgcattgctgttcgttgagaaccgcgaacgtcgtctgctgcgcaacatc
gaacgcatcatgaagctgactattccagaagttgaaatcccgaatgcagaattgctgggt
caacgtcgtctggctaagtttgccgctaaagttcagcagcagctggaaagcagcgatctg
gacaaataccgcgatctgctgactaaactgcagccggaagatgagctggatatggaaact
ctggccgcagcattgctgaaaatggcacagggcgaacgtcctctgatcctgccaccagat
ccagtaatggaacgtcgtccacgtcgcgaattccgtgaccgtgacgatcgcaacgaacgc
ggcggtgaccgtttcgctcgtcgtggcgaccgtgagccacgtgaagctcgcgaaggcgca
gctccacgtcgtgaacgtcgtgaagccggtgatatggaactgtaccgtattgaagttggc
cgtgatgatggtgttgaagttcgtcatatcgttggcgctatcgctaacgaaggtgatatc
agcagccgttacatcggtaacatcaagctgtttgcttctcactcaactatcgagctgcct
aaaggtatgccaggtgatctgctgtctcatttcacccgtacccgtatcctcaacaagccg
ctgaacatgcagctgatgggtgatgctccggcacgcgaaccacgtcgtgaacgcccagct
ggcgatcgcggtggccgcaacttcggtggtggtcgtgaaggtggtgagcgtcgtaacttc
ggtggacgtgatggcgcacctcgccgtgatgaccgtcgtggtaacagcgatcgtagcgca
gcaccacgcggcccacgtcgtgatgatgcagcacagccgccacgtcgtcgtactccgact
agcaacgacgcataa
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