Obesumbacterium proteus: DSM2777_22825
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Entry
DSM2777_22825 CDS
T04310
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
opo
Obesumbacterium proteus
Pathway
opo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
opo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DSM2777_22825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opo03019
]
DSM2777_22825
03016 Transfer RNA biogenesis [BR:
opo03016
]
DSM2777_22825
Enzymes [BR:
opo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DSM2777_22825
Messenger RNA biogenesis [BR:
opo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DSM2777_22825
Transfer RNA biogenesis [BR:
opo03016
]
Prokaryotic type
tRNA degradation factors
DSM2777_22825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
OB_RRP5_4th
S1_2
KH_2
S1_RRP5
aRib
UPF0181
KH-I_KHDC4-BBP
HTH_20
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
AMO83626
LinkDB
All DBs
Position
complement(4876418..4878532)
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AA seq
704 aa
AA seq
DB search
MLNPIVRKFQYGQNTVTLETGMMARQATAAVMVTMDDTAVFVTVVGAKKAKEGQSFFPLT
VNYQERTYAAGRFPGGFFRREGRPGEGETLIARLIDRPVRPLFPEGFLNEVQVVATVVSV
NPQVSPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTTDELQESKLDLVVA
GTEGAVLMVESEAQLLSEDQMLGAVVFGHDQQQVVIENIKALVAEAGKPRWEWTAPAVNE
ALHARVAALAETRIGDAYHITEKQARYAQVDQIKADVIAALQAEDESLSAGEIADVLGSL
EKNVVRSRVLRGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTER
DAQNIDGLTGEQTDRFLLHYNFPPYSVGETGMMGSPKRREIGHGRLAKRGVLAVMPKQDE
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEDENFVVLSD
ILGDEDHLGDMDFKVAGSREGITALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
INAPRGDISEFAPRIHTIKINPEKIKDVIGKGGSVIRALTDETGTTIEIEDDGTIKIAAT
DNEKAKHAIRRIEEITAEIEVGRIYQGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQDVPVKVLEVDRQGRVRLSIKEASAPEQAAAPAAE
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatcctatcgttcgcaaattccagtacggtcagaataccgtaacgctggaaact
ggcatgatggctcgccaagccactgctgctgtaatggttaccatggacgacactgcggta
ttcgttaccgttgttggtgctaaaaaagctaaagaaggccagagcttcttccctctgacc
gttaactatcaggagcgtacctacgccgctggtcgtttcccaggtggtttcttccgtcgt
gaaggccgtcctggtgaaggcgaaactctgattgcgcgtctgattgaccgcccagttcgc
ccactgttcccagaaggcttcctgaacgaagttcaggtagttgctaccgttgtttctgta
aacccgcaggttagcccagacatcgttgcgatgatcggtgcttctgctgccctgagcctg
tctggtattccattcaatggcccaatcggtgcagcccgcgttggttacatcaacgaccag
tatgtgctgaacccaacaacagatgagctgcaagaaagcaagctggatctggttgttgct
ggtaccgaaggtgcagtactgatggttgaatctgaagctcaactgctgagcgaagaccag
atgctgggtgccgttgtattcggtcacgatcagcagcaggttgttattgaaaacatcaaa
gcgctggttgctgaagctggtaaaccacgttgggaatggactgctccggctgtaaacgaa
gcgctgcacgcgcgcgttgctgctctggctgaaacccgtatcggcgatgcataccacatc
actgaaaaacaggctcgttacgctcaggttgatcagatcaaagctgacgttatcgctgct
ctgcaggctgaagacgaatctctgagcgctggcgaaatcgctgatgtactgggctctctg
gagaaaaatgttgtacgtagccgtgtgctgcgtggcgagccacgtatcgatggccgtgaa
aaagacatgatccgtggtctggacgttcgcactggcgtactgcctcgcacccatggttct
gcactgttcactcgtggtgaaactcaggctctggttaccgcaactctgggtacagaacgt
gatgctcagaacatcgatggcctgaccggcgagcagactgaccgcttcctgctacactat
aacttccctccgtactccgtaggggaaactggcatgatgggctcacctaagcgtcgtgaa
attggtcacggtcgtttggcgaagcgcggcgtgctggcagtaatgcctaagcaagacgaa
ttcccgtacaccgttcgtgtggtttcagaaatcaccgaatctaacggttcttcttctatg
gcctctgtttgtggtgcttcactggcactgatggacgcaggtgtgccgatcaaagctgcc
gttgctggtatcgctatgggtctggttaaagaagacgaaaacttcgtcgttctgtctgat
attctgggtgacgaagatcatctgggcgacatggacttcaaagttgcaggtagccgcgaa
ggtatcactgcgctgcagatggatattaaaatcgaaggcatcacccgcgaaatcatgcag
gtggctctgaatcaggctaaaggtgcacgtctgcacattctgggtgtaatggaacaggcg
attaacgcgccgcgtggcgatatctctgaattcgctccacgtatccataccatcaagatc
aatcctgagaagatcaaagatgtcatcggtaaaggtggttctgttattcgtgcattgact
gacgaaactggcacgactatcgaaatcgaagatgatggcacaattaaaattgcagcaacc
gacaacgaaaaagcgaaacatgctattcgtcgcatcgaagaaattactgctgaaatcgaa
gttggccgcatctatcagggtaaagtaacccgtatcgttgatttcggtgcattcgttgct
atcggtggcggtaaagaaggtctggtacatatttctcagatcgctgacaagcgtgttgag
aaagtgaccgactatctgcagatgggtcaggacgttcctgttaaggttctggaagttgac
cgtcagggtcgcgtccgcctgagcatcaaagaggcaagcgcgccagaacaggccgctgct
ccagctgctgaataa
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