Oceanithermus profundus: Ocepr_0261
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Entry
Ocepr_0261 CDS
T01369
Name
(GenBank) hypothetical protein
KO
K06958
RNase adapter protein RapZ
Organism
opr
Oceanithermus profundus
Brite
KEGG Orthology (KO) [BR:
opr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opr03019
]
Ocepr_0261
Messenger RNA biogenesis [BR:
opr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Ocepr_0261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_33
AAA_18
AAA_28
AAA_22
AAA_16
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ADR35723
UniProt:
E4U5V9
LinkDB
All DBs
Position
complement(251894..252727)
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AA seq
277 aa
AA seq
DB search
MRVVVISGLSGAGKSTALAHLEDLGYFAVDNLPPALWAELVATLKAAGVRRVALGIDVRA
RAFLDAAPSAIDALASGAEPVLVFLEARPEVLLARYNLTRRAHPLRGGHLLREIEAERRL
LAPLRGRADWILDTSETGPGELGQRLAQLLGEERPFVLRLISFGYKWGPPQVADLLLDVR
ALPNPHWEEALRPRTGTDPEVAAYVFTGEAEPYYRTLREAARRAAEAARAAGRSGYTVAV
GCTGGRHRSVAVVERLARELGEDFEVEREHRDVGKEG
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcgtcgtgatcagcggcctctccggcgccggcaagagcacggccctggcccac
ctggaagacctgggctactttgcggtggacaacctgccgcccgcgctctgggccgagctg
gtcgcgacgctgaaggccgcaggggtgcggcgggtcgcgctcgggatcgacgtgcgcgcc
cgcgccttcctggacgccgcgccgtccgcgatcgacgccctcgcctccggcgcggagccg
gtcctcgtcttcctcgaggcccggcccgaggtcctgctggcgcgctacaacctcacccgg
cgggcccaccccctccgcggcgggcacctgctgcgcgagatcgaggccgaacgcaggctg
ctggcccccctgcgcggccgcgccgactggatcctcgacaccagcgaaaccggtccgggc
gagctgggccagcggctggcccagctgctcggcgaggagcgccccttcgtgctgcgcctg
atctccttcggctacaagtgggggccgccccaggtggccgacctgctgctcgacgtgcgc
gccctgcccaacccccactgggaggaagcgctccgcccgcgcaccggcacggaccccgag
gtcgccgcctacgtcttcacgggggaggccgaaccctactaccgcaccctgcgcgaggcc
gcgcgccgcgccgccgaggcggcccgcgccgcggggcgcagcggctacaccgtcgccgtg
ggctgcaccggcgggcgccaccgctcggtggccgtcgtcgagcggctggcgcgcgaactg
ggcgaagacttcgaggtcgaacgggagcaccgcgatgtgggcaaagagggctag
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