Oceanithermus profundus: Ocepr_0568
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Entry
Ocepr_0568 CDS
T01369
Name
(GenBank) bacterial nucleoid protein Hbs
KO
K03530
DNA-binding protein HU-beta
Organism
opr
Oceanithermus profundus
Brite
KEGG Orthology (KO) [BR:
opr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
opr03032
]
Ocepr_0568
03036 Chromosome and associated proteins [BR:
opr03036
]
Ocepr_0568
03400 DNA repair and recombination proteins [BR:
opr03400
]
Ocepr_0568
DNA replication proteins [BR:
opr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Ocepr_0568
Chromosome and associated proteins [BR:
opr03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Ocepr_0568
DNA repair and recombination proteins [BR:
opr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Ocepr_0568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
RsmI_C
DUF4777
Motif
Other DBs
NCBI-ProteinID:
ADR36026
UniProt:
E4U723
LinkDB
All DBs
Position
complement(568868..569164)
Genome browser
AA seq
98 aa
AA seq
DB search
MANKKKTVTKSDLVNHVAEITGLKKKDAKACIDTFLDEIATFLDRDYKVQLTGFGTFEVR
KRKARTGVKPGTTEKIKIPASKYPAFKPGKALKEKVRV
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaagaagaagacggttacgaaatcggatctggtcaaccacgtcgccgagatc
accgggctgaagaagaaggacgcgaaggcctgcatcgataccttcctcgacgagatcgcc
accttcctcgaccgcgactacaaggtgcagctcaccggcttcgggaccttcgaggtgcgc
aagcgcaaggcccgcaccggcgtgaagcccggcaccaccgagaagatcaagatccccgcc
tccaagtacccggccttcaaacccggcaaggcgctgaaggaaaaagtccgcgtataa
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