Oceanithermus profundus: Ocepr_1022
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Entry
Ocepr_1022 CDS
T01369
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
opr
Oceanithermus profundus
Brite
KEGG Orthology (KO) [BR:
opr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
opr03400
]
Ocepr_1022
DNA repair and recombination proteins [BR:
opr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Ocepr_1022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
AAA_16
AAA_22
DnaB_C
Lon_C
DUF7129
RecA
KdpD
NTPase_1
nSTAND3
AAA_30
ATPase_2
MeaB
NPHP3_N
AAA_14
AAA_5
AAA_18
SLFN-g3_helicase
AAA_24
AAA
DAP3
GvpD_P-loop
Viral_helicase1
ABC_tran
AAA_29
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
ADR36479
UniProt:
E4U7N0
LinkDB
All DBs
Position
1049355..1050641
Genome browser
AA seq
428 aa
AA seq
DB search
MAKPKSQYRCVECGYRAPKSLGRCPGCGAWGSFLEERSDGGGSEAAPPAGVLPLAEVDAE
ALPRYSSGSEEVDRVLGGGFVPGAALLIGGEPGVGKSTLLLQVADRVLKSGKRVVYVAGE
ESPQQVKLRAERLGVSPRLELMRDTRLDAVLAGLDAHAPDLVVVDSIQTLESEGVPGSLV
AVRNATQALVRWAKASGGTLVLVGHVTKEGTVAGPKVIEHVVDATLYLETAGVFRVLRSA
KNRFGPVGEVGVFRMEHAGLVEVANPSEAFLAERPLGVPGSTVGLALYGERVIALEVQAL
AAKSPYAAPKRVAQGLDPRRVDVVLAVLERRLGLKLGHLDVYVNLAGGLRVSDPGLDLAV
ALAVYSAVMGRPVHPQTAAVGEVGLAGEVRSVTLLEARLREGRRAGFERVLGPGALPTVE
QAVREALA
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggccaagccgaagagccagtaccgctgcgtcgagtgcggctaccgcgcccccaagtcg
ctggggcgctgccccggctgcggcgcctggggcagcttcctcgaggagcggtcggatggg
ggcgggtccgaggccgcgccgcccgcaggggtcctgccgctcgccgaggtcgacgcggag
gcgctgccgcggtattcgagcgggagcgaagaggtggaccgcgtcctcggcggcgggttc
gtccccggcgcggcgctgctgatcggcggcgagcccggggtggggaagagcaccctgctg
ctgcaggtcgccgaccgggtgctgaagagcggcaagcgcgtcgtctacgtggccggtgaa
gagtcgccgcagcaggtcaagctgcgcgccgagcgcctgggggtgagcccccgcctcgag
ctgatgcgcgacacccggctggacgcggtgctggcggggctggacgctcacgctcccgac
ctggtcgtcgtcgactcgatccagaccctcgagtccgagggcgtgcccggctccctggtc
gcggtgcgcaacgccacccaggccctggttcgctgggccaaggcctccggcggcacgctg
gtgctcgtcggtcacgttaccaaggaggggaccgtcgccggtcccaaggtcatcgaacac
gtggtggacgcgacgctctacctggagacggccggggtctttcgggtgctgcgctcggcg
aagaaccgcttcgggccggtgggcgaggtgggcgtcttccggatggagcacgccggcctg
gtggaggtggccaacccttccgaggccttcctggccgagcggccgctcggggtgccgggc
tccaccgtgggcctcgccctctacggcgagcgggtgatcgcgctcgaggtccaggcgctc
gccgccaagagcccctacgccgcgcccaagcgcgtggcccaggggctcgacccgcggcgc
gtggacgtggtgctggcggtgctggaacggcggctcggcctcaagctgggccacctcgac
gtctacgtcaacctggccggcggcctgcgcgtgagcgacccgggcctcgacctggccgtg
gccctcgccgtgtattctgcggtcatgggccgcccggtgcacccccagaccgccgccgtg
ggcgaggtgggcctggccggcgaggtccgctccgtcacgctcctggaggcgcggctgcgt
gaagggcggcgcgccggcttcgaacgcgtactgggtccgggggcgctcccgaccgtcgag
caggccgtgcgggaggccctggcatga
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